Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SPENQ96T58 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SPENQ96T58 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SPENQ96T58 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
SPENQ96T58 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
SPENQ96T58 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SPENQ96T58 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SPENQ96T58 AP005242.2-201ENST00000580065 1175 ntBASIC17.99■□□□□ 0.47
SPENQ96T58 AL445675.2-201ENST00000620291 557 ntBASIC17.99■□□□□ 0.47
SPENQ96T58 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SPENQ96T58 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SPENQ96T58 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
SPENQ96T58 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
SPENQ96T58 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SPENQ96T58 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SPENQ96T58 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
SPENQ96T58 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SPENQ96T58 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
SPENQ96T58 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC17.99■□□□□ 0.47
SPENQ96T58 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC17.99■□□□□ 0.47
SPENQ96T58 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC17.99■□□□□ 0.47
SPENQ96T58 KRT126P-201ENST00000549467 1181 ntBASIC17.99■□□□□ 0.47
SPENQ96T58 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC17.99■□□□□ 0.47
SPENQ96T58 AL031985.4-201ENST00000642138 673 ntBASIC17.99■□□□□ 0.47
SPENQ96T58 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
SPENQ96T58 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
SPENQ96T58 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
SPENQ96T58 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SPENQ96T58 Z98882.1-201ENST00000622160 2253 ntBASIC17.98■□□□□ 0.47
SPENQ96T58 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SPENQ96T58 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SPENQ96T58 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
SPENQ96T58 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SPENQ96T58 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SPENQ96T58 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
SPENQ96T58 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SPENQ96T58 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC17.98■□□□□ 0.47
SPENQ96T58 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
SPENQ96T58 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC17.98■□□□□ 0.47
SPENQ96T58 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
SPENQ96T58 CR392000.1-201ENST00000624770 1228 ntBASIC17.98■□□□□ 0.47
SPENQ96T58 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SPENQ96T58 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
SPENQ96T58 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC17.98■□□□□ 0.47
SPENQ96T58 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
SPENQ96T58 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SPENQ96T58 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SPENQ96T58 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
SPENQ96T58 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
SPENQ96T58 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
SPENQ96T58 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
SPENQ96T58 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC17.97■□□□□ 0.47
SPENQ96T58 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC17.97■□□□□ 0.47
SPENQ96T58 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC17.97■□□□□ 0.47
SPENQ96T58 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
SPENQ96T58 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC17.97■□□□□ 0.47
SPENQ96T58 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC17.97■□□□□ 0.47
SPENQ96T58 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC17.97■□□□□ 0.47
SPENQ96T58 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC17.97■□□□□ 0.47
SPENQ96T58 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SPENQ96T58 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC17.97■□□□□ 0.47
SPENQ96T58 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC17.97■□□□□ 0.47
SPENQ96T58 KRT18P48-201ENST00000434763 852 ntBASIC17.97■□□□□ 0.47
SPENQ96T58 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC17.97■□□□□ 0.47
SPENQ96T58 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC17.97■□□□□ 0.47
SPENQ96T58 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SPENQ96T58 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SPENQ96T58 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SPENQ96T58 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
SPENQ96T58 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SPENQ96T58 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SPENQ96T58 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
SPENQ96T58 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC17.96■□□□□ 0.47
SPENQ96T58 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC17.96■□□□□ 0.47
SPENQ96T58 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
SPENQ96T58 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC17.96■□□□□ 0.47
SPENQ96T58 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC17.96■□□□□ 0.47
SPENQ96T58 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC17.96■□□□□ 0.47
SPENQ96T58 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SPENQ96T58 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC17.96■□□□□ 0.47
SPENQ96T58 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC17.96■□□□□ 0.47
SPENQ96T58 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC17.96■□□□□ 0.47
SPENQ96T58 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC17.96■□□□□ 0.47
SPENQ96T58 AC026396.1-201ENST00000419388 421 ntBASIC17.96■□□□□ 0.47
SPENQ96T58 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC17.96■□□□□ 0.47
SPENQ96T58 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC17.96■□□□□ 0.47
SPENQ96T58 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SPENQ96T58 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SPENQ96T58 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
SPENQ96T58 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC17.96■□□□□ 0.46
SPENQ96T58 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
SPENQ96T58 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SPENQ96T58 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
SPENQ96T58 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC17.95■□□□□ 0.46
SPENQ96T58 ATP5G1P1-201ENST00000448724 379 ntBASIC17.95■□□□□ 0.46
SPENQ96T58 AC063952.2-201ENST00000498792 1227 ntBASIC17.95■□□□□ 0.46
SPENQ96T58 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SPENQ96T58 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SPENQ96T58 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC17.95■□□□□ 0.46
SPENQ96T58 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms