Protein–RNA interactions for Protein: Q96RK1

CITED4, Cbp/p300-interacting transactivator 4, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CITED4Q96RK1 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CITED4Q96RK1 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC16.94■□□□□ 0.3
CITED4Q96RK1 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC16.94■□□□□ 0.3
CITED4Q96RK1 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC16.94■□□□□ 0.3
CITED4Q96RK1 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC16.94■□□□□ 0.3
CITED4Q96RK1 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CITED4Q96RK1 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC16.94■□□□□ 0.3
CITED4Q96RK1 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CITED4Q96RK1 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
CITED4Q96RK1 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CITED4Q96RK1 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
CITED4Q96RK1 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CITED4Q96RK1 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC16.94■□□□□ 0.3
CITED4Q96RK1 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CITED4Q96RK1 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CITED4Q96RK1 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CITED4Q96RK1 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CITED4Q96RK1 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC16.93■□□□□ 0.3
CITED4Q96RK1 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CITED4Q96RK1 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CITED4Q96RK1 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CITED4Q96RK1 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
CITED4Q96RK1 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CITED4Q96RK1 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CITED4Q96RK1 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CITED4Q96RK1 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC16.93■□□□□ 0.3
CITED4Q96RK1 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CITED4Q96RK1 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CITED4Q96RK1 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CITED4Q96RK1 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CITED4Q96RK1 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
CITED4Q96RK1 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CITED4Q96RK1 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
CITED4Q96RK1 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
CITED4Q96RK1 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CITED4Q96RK1 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC16.93■□□□□ 0.3
CITED4Q96RK1 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC16.93■□□□□ 0.3
CITED4Q96RK1 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CITED4Q96RK1 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CITED4Q96RK1 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CITED4Q96RK1 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
CITED4Q96RK1 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CITED4Q96RK1 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.93■□□□□ 0.3
CITED4Q96RK1 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CITED4Q96RK1 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC16.93■□□□□ 0.3
CITED4Q96RK1 BID-203ENST00000399765 1879 ntTSL 2 BASIC16.93■□□□□ 0.3
CITED4Q96RK1 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC16.92■□□□□ 0.3
CITED4Q96RK1 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.92■□□□□ 0.3
CITED4Q96RK1 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CITED4Q96RK1 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CITED4Q96RK1 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CITED4Q96RK1 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CITED4Q96RK1 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CITED4Q96RK1 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CITED4Q96RK1 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CITED4Q96RK1 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
CITED4Q96RK1 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CITED4Q96RK1 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC16.92■□□□□ 0.3
CITED4Q96RK1 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
CITED4Q96RK1 PRORSD1P-202ENST00000563365 2154 ntBASIC16.92■□□□□ 0.3
CITED4Q96RK1 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.92■□□□□ 0.3
CITED4Q96RK1 AC005703.6-201ENST00000623265 1329 ntBASIC16.92■□□□□ 0.3
CITED4Q96RK1 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC16.92■□□□□ 0.3
CITED4Q96RK1 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.92■□□□□ 0.3
CITED4Q96RK1 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CITED4Q96RK1 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CITED4Q96RK1 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CITED4Q96RK1 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CITED4Q96RK1 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CITED4Q96RK1 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC16.91■□□□□ 0.3
CITED4Q96RK1 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CITED4Q96RK1 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CITED4Q96RK1 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CITED4Q96RK1 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CITED4Q96RK1 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CITED4Q96RK1 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CITED4Q96RK1 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC16.91■□□□□ 0.3
CITED4Q96RK1 AC026271.2-201ENST00000428091 497 ntBASIC16.91■□□□□ 0.3
CITED4Q96RK1 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
CITED4Q96RK1 MIR5787-201ENST00000611784 55 ntBASIC16.91■□□□□ 0.3
CITED4Q96RK1 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CITED4Q96RK1 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC16.91■□□□□ 0.3
CITED4Q96RK1 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CITED4Q96RK1 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CITED4Q96RK1 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CITED4Q96RK1 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC16.91■□□□□ 0.3
CITED4Q96RK1 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CITED4Q96RK1 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CITED4Q96RK1 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC16.91■□□□□ 0.3
CITED4Q96RK1 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.91■□□□□ 0.3
CITED4Q96RK1 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CITED4Q96RK1 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CITED4Q96RK1 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CITED4Q96RK1 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
CITED4Q96RK1 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
CITED4Q96RK1 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
CITED4Q96RK1 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC16.9■□□□□ 0.3
CITED4Q96RK1 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC16.9■□□□□ 0.3
CITED4Q96RK1 COMP-202ENST00000425807 2292 ntTSL 2 BASIC16.9■□□□□ 0.3
CITED4Q96RK1 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms