Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
C9orf72Q96LT7 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.39■□□□□ 0.85
C9orf72Q96LT7 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC20.39■□□□□ 0.85
C9orf72Q96LT7 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.39■□□□□ 0.85
C9orf72Q96LT7 SLC7A5P1-201ENST00000568957 537 ntBASIC20.39■□□□□ 0.85
C9orf72Q96LT7 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
C9orf72Q96LT7 WT1-AS_3.1-201ENST00000613262 234 ntBASIC20.39■□□□□ 0.85
C9orf72Q96LT7 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC20.39■□□□□ 0.85
C9orf72Q96LT7 AC010536.3-201ENST00000620306 533 ntBASIC20.39■□□□□ 0.85
C9orf72Q96LT7 PARP1-210ENST00000629232 477 ntTSL 5 BASIC20.39■□□□□ 0.85
C9orf72Q96LT7 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
C9orf72Q96LT7 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
C9orf72Q96LT7 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC20.39■□□□□ 0.85
C9orf72Q96LT7 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC20.39■□□□□ 0.85
C9orf72Q96LT7 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
C9orf72Q96LT7 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
C9orf72Q96LT7 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
C9orf72Q96LT7 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
C9orf72Q96LT7 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
C9orf72Q96LT7 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC20.38■□□□□ 0.85
C9orf72Q96LT7 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
C9orf72Q96LT7 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC20.38■□□□□ 0.85
C9orf72Q96LT7 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
C9orf72Q96LT7 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
C9orf72Q96LT7 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC20.38■□□□□ 0.85
C9orf72Q96LT7 GPX1P1-201ENST00000388829 606 ntBASIC20.38■□□□□ 0.85
C9orf72Q96LT7 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC20.38■□□□□ 0.85
C9orf72Q96LT7 AC005181.1-201ENST00000604782 1256 ntBASIC20.38■□□□□ 0.85
C9orf72Q96LT7 AL050303.2-201ENST00000619798 666 ntBASIC20.38■□□□□ 0.85
C9orf72Q96LT7 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC20.38■□□□□ 0.85
C9orf72Q96LT7 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.38■□□□□ 0.85
C9orf72Q96LT7 AC004408.2-201ENST00000623613 2777 ntBASIC20.38■□□□□ 0.85
C9orf72Q96LT7 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
C9orf72Q96LT7 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
C9orf72Q96LT7 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
C9orf72Q96LT7 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC20.37■□□□□ 0.85
C9orf72Q96LT7 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
C9orf72Q96LT7 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC20.37■□□□□ 0.85
C9orf72Q96LT7 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC20.37■□□□□ 0.85
C9orf72Q96LT7 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC20.37■□□□□ 0.85
C9orf72Q96LT7 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC20.37■□□□□ 0.85
C9orf72Q96LT7 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC20.37■□□□□ 0.85
C9orf72Q96LT7 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20.37■□□□□ 0.85
C9orf72Q96LT7 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC20.37■□□□□ 0.85
C9orf72Q96LT7 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
C9orf72Q96LT7 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
C9orf72Q96LT7 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC20.37■□□□□ 0.85
C9orf72Q96LT7 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC20.37■□□□□ 0.85
C9orf72Q96LT7 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.37■□□□□ 0.85
C9orf72Q96LT7 EMC9-206ENST00000560403 872 ntTSL 2 BASIC20.37■□□□□ 0.85
C9orf72Q96LT7 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC20.37■□□□□ 0.85
C9orf72Q96LT7 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
C9orf72Q96LT7 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
C9orf72Q96LT7 TNXA-203ENST00000507684 2038 ntBASIC20.37■□□□□ 0.85
C9orf72Q96LT7 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
C9orf72Q96LT7 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
C9orf72Q96LT7 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
C9orf72Q96LT7 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
C9orf72Q96LT7 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
C9orf72Q96LT7 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
C9orf72Q96LT7 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC20.36■□□□□ 0.85
C9orf72Q96LT7 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
C9orf72Q96LT7 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC20.36■□□□□ 0.85
C9orf72Q96LT7 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
C9orf72Q96LT7 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC20.36■□□□□ 0.85
C9orf72Q96LT7 CNN2P6-201ENST00000439038 900 ntBASIC20.36■□□□□ 0.85
C9orf72Q96LT7 CDV3P1-201ENST00000471403 739 ntBASIC20.36■□□□□ 0.85
C9orf72Q96LT7 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC20.36■□□□□ 0.85
C9orf72Q96LT7 AL121832.2-201ENST00000610979 668 ntBASIC20.36■□□□□ 0.85
C9orf72Q96LT7 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
C9orf72Q96LT7 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
C9orf72Q96LT7 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC20.36■□□□□ 0.85
C9orf72Q96LT7 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
C9orf72Q96LT7 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
C9orf72Q96LT7 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
C9orf72Q96LT7 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC20.36■□□□□ 0.85
C9orf72Q96LT7 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
C9orf72Q96LT7 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
C9orf72Q96LT7 STK25-205ENST00000405883 1904 ntTSL 2 BASIC20.35■□□□□ 0.85
C9orf72Q96LT7 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC20.35■□□□□ 0.85
C9orf72Q96LT7 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
C9orf72Q96LT7 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
C9orf72Q96LT7 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC20.35■□□□□ 0.85
C9orf72Q96LT7 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
C9orf72Q96LT7 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
C9orf72Q96LT7 VMO1-204ENST00000441199 741 ntTSL 2 BASIC20.35■□□□□ 0.85
C9orf72Q96LT7 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC20.35■□□□□ 0.85
C9orf72Q96LT7 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
C9orf72Q96LT7 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
C9orf72Q96LT7 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC20.35■□□□□ 0.85
C9orf72Q96LT7 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
C9orf72Q96LT7 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
C9orf72Q96LT7 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
C9orf72Q96LT7 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
C9orf72Q96LT7 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
C9orf72Q96LT7 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC20.35■□□□□ 0.85
C9orf72Q96LT7 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC20.35■□□□□ 0.85
C9orf72Q96LT7 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
C9orf72Q96LT7 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
C9orf72Q96LT7 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms