Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
IFT43Q96FT9 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC20.41■□□□□ 0.86
IFT43Q96FT9 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC20.41■□□□□ 0.86
IFT43Q96FT9 OR2A1-AS1-201ENST00000462305 773 ntBASIC20.41■□□□□ 0.86
IFT43Q96FT9 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC20.41■□□□□ 0.86
IFT43Q96FT9 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC20.41■□□□□ 0.86
IFT43Q96FT9 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC20.41■□□□□ 0.86
IFT43Q96FT9 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC20.41■□□□□ 0.86
IFT43Q96FT9 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
IFT43Q96FT9 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
IFT43Q96FT9 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
IFT43Q96FT9 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
IFT43Q96FT9 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.41■□□□□ 0.86
IFT43Q96FT9 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.41■□□□□ 0.86
IFT43Q96FT9 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.41■□□□□ 0.86
IFT43Q96FT9 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
IFT43Q96FT9 AL512408.1-201ENST00000569378 2000 ntBASIC20.41■□□□□ 0.86
IFT43Q96FT9 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.41■□□□□ 0.86
IFT43Q96FT9 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
IFT43Q96FT9 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
IFT43Q96FT9 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
IFT43Q96FT9 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
IFT43Q96FT9 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
IFT43Q96FT9 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
IFT43Q96FT9 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.4■□□□□ 0.86
IFT43Q96FT9 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
IFT43Q96FT9 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
IFT43Q96FT9 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
IFT43Q96FT9 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC20.4■□□□□ 0.86
IFT43Q96FT9 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
IFT43Q96FT9 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC20.4■□□□□ 0.86
IFT43Q96FT9 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC20.4■□□□□ 0.86
IFT43Q96FT9 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC20.4■□□□□ 0.86
IFT43Q96FT9 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC20.4■□□□□ 0.86
IFT43Q96FT9 UNC93B5-201ENST00000530315 699 ntBASIC20.4■□□□□ 0.86
IFT43Q96FT9 NXN-202ENST00000537628 1340 ntTSL 3 BASIC20.4■□□□□ 0.86
IFT43Q96FT9 MMAB-206ENST00000540016 945 ntTSL 3 BASIC20.4■□□□□ 0.86
IFT43Q96FT9 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
IFT43Q96FT9 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC20.4■□□□□ 0.86
IFT43Q96FT9 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC20.4■□□□□ 0.86
IFT43Q96FT9 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
IFT43Q96FT9 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
IFT43Q96FT9 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
IFT43Q96FT9 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.39■□□□□ 0.86
IFT43Q96FT9 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
IFT43Q96FT9 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.39■□□□□ 0.86
IFT43Q96FT9 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
IFT43Q96FT9 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
IFT43Q96FT9 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC20.39■□□□□ 0.86
IFT43Q96FT9 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC20.39■□□□□ 0.86
IFT43Q96FT9 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
IFT43Q96FT9 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
IFT43Q96FT9 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
IFT43Q96FT9 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
IFT43Q96FT9 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC20.39■□□□□ 0.85
IFT43Q96FT9 BRWD1-AS2-201ENST00000603064 1028 ntBASIC20.39■□□□□ 0.85
IFT43Q96FT9 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
IFT43Q96FT9 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
IFT43Q96FT9 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
IFT43Q96FT9 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
IFT43Q96FT9 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
IFT43Q96FT9 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
IFT43Q96FT9 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
IFT43Q96FT9 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
IFT43Q96FT9 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
IFT43Q96FT9 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
IFT43Q96FT9 NME6-213ENST00000451657 871 ntTSL 2 BASIC20.38■□□□□ 0.85
IFT43Q96FT9 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC20.38■□□□□ 0.85
IFT43Q96FT9 AC026366.1-201ENST00000488803 879 ntBASIC20.38■□□□□ 0.85
IFT43Q96FT9 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
IFT43Q96FT9 C2orf69P4-201ENST00000565394 541 ntBASIC20.38■□□□□ 0.85
IFT43Q96FT9 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC20.38■□□□□ 0.85
IFT43Q96FT9 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
IFT43Q96FT9 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.38■□□□□ 0.85
IFT43Q96FT9 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
IFT43Q96FT9 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
IFT43Q96FT9 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
IFT43Q96FT9 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.37■□□□□ 0.85
IFT43Q96FT9 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
IFT43Q96FT9 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
IFT43Q96FT9 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
IFT43Q96FT9 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
IFT43Q96FT9 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
IFT43Q96FT9 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
IFT43Q96FT9 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
IFT43Q96FT9 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
IFT43Q96FT9 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
IFT43Q96FT9 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
IFT43Q96FT9 GATS-209ENST00000454084 1030 ntTSL 3 BASIC20.37■□□□□ 0.85
IFT43Q96FT9 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
IFT43Q96FT9 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
IFT43Q96FT9 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC20.37■□□□□ 0.85
IFT43Q96FT9 HLA-B-256ENST00000639848 1089 ntBASIC20.37■□□□□ 0.85
IFT43Q96FT9 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
IFT43Q96FT9 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
IFT43Q96FT9 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
IFT43Q96FT9 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
IFT43Q96FT9 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
IFT43Q96FT9 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
IFT43Q96FT9 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms