Protein–RNA interactions for Protein: Q96EA4

SPDL1, Protein Spindly, humanhuman

Predictions only

Length 605 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDL1Q96EA4 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SPDL1Q96EA4 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC19.49■□□□□ 0.71
SPDL1Q96EA4 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.49■□□□□ 0.71
SPDL1Q96EA4 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SPDL1Q96EA4 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SPDL1Q96EA4 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC19.49■□□□□ 0.71
SPDL1Q96EA4 AC245052.3-201ENST00000450182 901 ntBASIC19.49■□□□□ 0.71
SPDL1Q96EA4 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC19.49■□□□□ 0.71
SPDL1Q96EA4 MIR2861-201ENST00000636310 90 ntBASIC19.49■□□□□ 0.71
SPDL1Q96EA4 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SPDL1Q96EA4 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
SPDL1Q96EA4 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SPDL1Q96EA4 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC19.49■□□□□ 0.71
SPDL1Q96EA4 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SPDL1Q96EA4 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
SPDL1Q96EA4 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC19.49■□□□□ 0.71
SPDL1Q96EA4 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
SPDL1Q96EA4 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
SPDL1Q96EA4 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
SPDL1Q96EA4 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.48■□□□□ 0.71
SPDL1Q96EA4 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SPDL1Q96EA4 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC19.48■□□□□ 0.71
SPDL1Q96EA4 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SPDL1Q96EA4 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SPDL1Q96EA4 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
SPDL1Q96EA4 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
SPDL1Q96EA4 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SPDL1Q96EA4 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.48■□□□□ 0.71
SPDL1Q96EA4 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
SPDL1Q96EA4 EBPL-204ENST00000378272 766 ntTSL 3 BASIC19.48■□□□□ 0.71
SPDL1Q96EA4 MIR939-201ENST00000401314 82 ntBASIC19.48■□□□□ 0.71
SPDL1Q96EA4 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC19.48■□□□□ 0.71
SPDL1Q96EA4 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC19.48■□□□□ 0.71
SPDL1Q96EA4 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC19.48■□□□□ 0.71
SPDL1Q96EA4 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC19.48■□□□□ 0.71
SPDL1Q96EA4 AL355001.2-201ENST00000620617 1191 ntBASIC19.48■□□□□ 0.71
SPDL1Q96EA4 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SPDL1Q96EA4 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SPDL1Q96EA4 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SPDL1Q96EA4 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SPDL1Q96EA4 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
SPDL1Q96EA4 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
SPDL1Q96EA4 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC19.47■□□□□ 0.71
SPDL1Q96EA4 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SPDL1Q96EA4 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SPDL1Q96EA4 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC19.47■□□□□ 0.71
SPDL1Q96EA4 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SPDL1Q96EA4 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.47■□□□□ 0.71
SPDL1Q96EA4 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SPDL1Q96EA4 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.47■□□□□ 0.71
SPDL1Q96EA4 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC19.47■□□□□ 0.71
SPDL1Q96EA4 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
SPDL1Q96EA4 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.47■□□□□ 0.71
SPDL1Q96EA4 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC19.47■□□□□ 0.71
SPDL1Q96EA4 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC19.47■□□□□ 0.71
SPDL1Q96EA4 AF213884.3-201ENST00000563833 479 ntBASIC19.47■□□□□ 0.71
SPDL1Q96EA4 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC19.47■□□□□ 0.71
SPDL1Q96EA4 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SPDL1Q96EA4 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SPDL1Q96EA4 KRT16P2-201ENST00000414673 1423 ntBASIC19.47■□□□□ 0.71
SPDL1Q96EA4 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SPDL1Q96EA4 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SPDL1Q96EA4 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.47■□□□□ 0.71
SPDL1Q96EA4 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC19.47■□□□□ 0.71
SPDL1Q96EA4 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC19.47■□□□□ 0.71
SPDL1Q96EA4 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC19.47■□□□□ 0.71
SPDL1Q96EA4 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SPDL1Q96EA4 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SPDL1Q96EA4 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC19.47■□□□□ 0.71
SPDL1Q96EA4 KRT87P-202ENST00000534226 1464 ntBASIC19.47■□□□□ 0.71
SPDL1Q96EA4 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SPDL1Q96EA4 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.46■□□□□ 0.71
SPDL1Q96EA4 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SPDL1Q96EA4 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SPDL1Q96EA4 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SPDL1Q96EA4 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
SPDL1Q96EA4 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SPDL1Q96EA4 NT5C3AP1-201ENST00000394500 1012 ntBASIC19.46■□□□□ 0.71
SPDL1Q96EA4 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC19.46■□□□□ 0.71
SPDL1Q96EA4 AC091305.1-201ENST00000479476 895 ntBASIC19.46■□□□□ 0.71
SPDL1Q96EA4 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SPDL1Q96EA4 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
SPDL1Q96EA4 AL354811.1-201ENST00000610286 706 ntBASIC19.46■□□□□ 0.71
SPDL1Q96EA4 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC19.46■□□□□ 0.71
SPDL1Q96EA4 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC19.46■□□□□ 0.71
SPDL1Q96EA4 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SPDL1Q96EA4 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
SPDL1Q96EA4 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC19.46■□□□□ 0.71
SPDL1Q96EA4 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SPDL1Q96EA4 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC19.46■□□□□ 0.71
SPDL1Q96EA4 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SPDL1Q96EA4 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
SPDL1Q96EA4 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SPDL1Q96EA4 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SPDL1Q96EA4 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC19.45■□□□□ 0.7
SPDL1Q96EA4 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
SPDL1Q96EA4 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SPDL1Q96EA4 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SPDL1Q96EA4 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SPDL1Q96EA4 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms