Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ATP2A3Q93084 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ATP2A3Q93084 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
ATP2A3Q93084 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.87■□□□□ 0.93
ATP2A3Q93084 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
ATP2A3Q93084 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ATP2A3Q93084 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
ATP2A3Q93084 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ATP2A3Q93084 SERF2-207ENST00000409614 582 ntTSL 2 BASIC20.87■□□□□ 0.93
ATP2A3Q93084 AC012618.2-201ENST00000428058 849 ntBASIC20.87■□□□□ 0.93
ATP2A3Q93084 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
ATP2A3Q93084 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ATP2A3Q93084 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC20.87■□□□□ 0.93
ATP2A3Q93084 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
ATP2A3Q93084 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
ATP2A3Q93084 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
ATP2A3Q93084 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ATP2A3Q93084 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ATP2A3Q93084 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC20.87■□□□□ 0.93
ATP2A3Q93084 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ATP2A3Q93084 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ATP2A3Q93084 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ATP2A3Q93084 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
ATP2A3Q93084 GABARAPL3-202ENST00000624044 1851 ntBASIC20.86■□□□□ 0.93
ATP2A3Q93084 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
ATP2A3Q93084 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
ATP2A3Q93084 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC20.86■□□□□ 0.93
ATP2A3Q93084 SNORA78-201ENST00000459373 127 ntBASIC20.86■□□□□ 0.93
ATP2A3Q93084 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ATP2A3Q93084 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC20.86■□□□□ 0.93
ATP2A3Q93084 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC20.86■□□□□ 0.93
ATP2A3Q93084 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC20.86■□□□□ 0.93
ATP2A3Q93084 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC20.86■□□□□ 0.93
ATP2A3Q93084 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC20.86■□□□□ 0.93
ATP2A3Q93084 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC20.86■□□□□ 0.93
ATP2A3Q93084 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
ATP2A3Q93084 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.86■□□□□ 0.93
ATP2A3Q93084 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ATP2A3Q93084 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ATP2A3Q93084 STAC-204ENST00000457375 1366 ntTSL 2 BASIC20.85■□□□□ 0.93
ATP2A3Q93084 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
ATP2A3Q93084 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ATP2A3Q93084 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC20.85■□□□□ 0.93
ATP2A3Q93084 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
ATP2A3Q93084 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC20.85■□□□□ 0.93
ATP2A3Q93084 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC20.85■□□□□ 0.93
ATP2A3Q93084 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ATP2A3Q93084 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.85■□□□□ 0.93
ATP2A3Q93084 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ATP2A3Q93084 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ATP2A3Q93084 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
ATP2A3Q93084 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
ATP2A3Q93084 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ATP2A3Q93084 STK25-205ENST00000405883 1904 ntTSL 2 BASIC20.85■□□□□ 0.93
ATP2A3Q93084 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ATP2A3Q93084 MDFI-202ENST00000373050 809 ntTSL 2 BASIC20.85■□□□□ 0.93
ATP2A3Q93084 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC20.85■□□□□ 0.93
ATP2A3Q93084 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC20.85■□□□□ 0.93
ATP2A3Q93084 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ATP2A3Q93084 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.85■□□□□ 0.93
ATP2A3Q93084 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
ATP2A3Q93084 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
ATP2A3Q93084 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.85■□□□□ 0.93
ATP2A3Q93084 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
ATP2A3Q93084 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ATP2A3Q93084 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.85■□□□□ 0.93
ATP2A3Q93084 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
ATP2A3Q93084 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
ATP2A3Q93084 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ATP2A3Q93084 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
ATP2A3Q93084 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ATP2A3Q93084 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ATP2A3Q93084 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ATP2A3Q93084 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20.84■□□□□ 0.93
ATP2A3Q93084 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC20.84■□□□□ 0.93
ATP2A3Q93084 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ATP2A3Q93084 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ATP2A3Q93084 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ATP2A3Q93084 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ATP2A3Q93084 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ATP2A3Q93084 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC20.84■□□□□ 0.93
ATP2A3Q93084 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC20.84■□□□□ 0.93
ATP2A3Q93084 AC110285.5-201ENST00000611501 352 ntBASIC20.84■□□□□ 0.93
ATP2A3Q93084 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ATP2A3Q93084 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC20.84■□□□□ 0.93
ATP2A3Q93084 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.84■□□□□ 0.93
ATP2A3Q93084 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ATP2A3Q93084 AC027702.1-201ENST00000563810 1770 ntBASIC20.84■□□□□ 0.93
ATP2A3Q93084 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
ATP2A3Q93084 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ATP2A3Q93084 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ATP2A3Q93084 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.83■□□□□ 0.93
ATP2A3Q93084 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
ATP2A3Q93084 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.83■□□□□ 0.93
ATP2A3Q93084 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
ATP2A3Q93084 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
ATP2A3Q93084 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
ATP2A3Q93084 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ATP2A3Q93084 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
ATP2A3Q93084 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms