Protein–RNA interactions for Protein: Q92995

USP13, Ubiquitin carboxyl-terminal hydrolase 13, humanhuman

Predicted RBP Predictions only

Length 863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP13Q92995 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
USP13Q92995 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
USP13Q92995 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.78■□□□□ 0.92
USP13Q92995 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
USP13Q92995 NBPF21P-201ENST00000425093 1451 ntBASIC20.78■□□□□ 0.92
USP13Q92995 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
USP13Q92995 AC211429.1-201ENST00000415277 523 ntBASIC20.78■□□□□ 0.92
USP13Q92995 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
USP13Q92995 TSPY15P-201ENST00000457163 923 ntBASIC20.78■□□□□ 0.92
USP13Q92995 F2R-202ENST00000505600 442 ntTSL 2 BASIC20.78■□□□□ 0.92
USP13Q92995 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC20.78■□□□□ 0.92
USP13Q92995 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC20.78■□□□□ 0.92
USP13Q92995 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC20.78■□□□□ 0.92
USP13Q92995 MIR4785-201ENST00000585005 73 ntBASIC20.78■□□□□ 0.92
USP13Q92995 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
USP13Q92995 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
USP13Q92995 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
USP13Q92995 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.78■□□□□ 0.92
USP13Q92995 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
USP13Q92995 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
USP13Q92995 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.78■□□□□ 0.92
USP13Q92995 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.78■□□□□ 0.92
USP13Q92995 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
USP13Q92995 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
USP13Q92995 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC20.77■□□□□ 0.92
USP13Q92995 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC20.77■□□□□ 0.92
USP13Q92995 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
USP13Q92995 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
USP13Q92995 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
USP13Q92995 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
USP13Q92995 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
USP13Q92995 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC20.77■□□□□ 0.92
USP13Q92995 PENK-204ENST00000518770 863 ntTSL 2 BASIC20.77■□□□□ 0.92
USP13Q92995 RPS20-210ENST00000523936 899 ntTSL 2 BASIC20.77■□□□□ 0.92
USP13Q92995 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC20.77■□□□□ 0.92
USP13Q92995 PNN-205ENST00000556530 601 ntTSL 2 BASIC20.77■□□□□ 0.92
USP13Q92995 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
USP13Q92995 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC20.77■□□□□ 0.92
USP13Q92995 AL121906.2-201ENST00000621597 723 ntBASIC20.77■□□□□ 0.92
USP13Q92995 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
USP13Q92995 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.77■□□□□ 0.92
USP13Q92995 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
USP13Q92995 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.91
USP13Q92995 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
USP13Q92995 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
USP13Q92995 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
USP13Q92995 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
USP13Q92995 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
USP13Q92995 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
USP13Q92995 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
USP13Q92995 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
USP13Q92995 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
USP13Q92995 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
USP13Q92995 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC20.76■□□□□ 0.91
USP13Q92995 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
USP13Q92995 HLA-G-202ENST00000376815 851 ntBASIC20.76■□□□□ 0.91
USP13Q92995 HLA-G-203ENST00000376818 1127 ntBASIC20.76■□□□□ 0.91
USP13Q92995 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC20.76■□□□□ 0.91
USP13Q92995 KRT16P5-201ENST00000455284 522 ntBASIC20.76■□□□□ 0.91
USP13Q92995 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
USP13Q92995 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC20.76■□□□□ 0.91
USP13Q92995 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC20.76■□□□□ 0.91
USP13Q92995 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC20.76■□□□□ 0.91
USP13Q92995 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
USP13Q92995 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.76■□□□□ 0.91
USP13Q92995 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.76■□□□□ 0.91
USP13Q92995 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
USP13Q92995 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
USP13Q92995 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
USP13Q92995 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
USP13Q92995 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
USP13Q92995 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
USP13Q92995 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
USP13Q92995 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC20.75■□□□□ 0.91
USP13Q92995 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
USP13Q92995 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
USP13Q92995 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
USP13Q92995 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
USP13Q92995 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
USP13Q92995 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC20.75■□□□□ 0.91
USP13Q92995 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
USP13Q92995 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC20.75■□□□□ 0.91
USP13Q92995 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC20.75■□□□□ 0.91
USP13Q92995 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
USP13Q92995 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC20.75■□□□□ 0.91
USP13Q92995 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
USP13Q92995 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
USP13Q92995 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
USP13Q92995 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
USP13Q92995 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
USP13Q92995 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC20.75■□□□□ 0.91
USP13Q92995 HTR7P1-201ENST00000538670 1336 ntBASIC20.75■□□□□ 0.91
USP13Q92995 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC20.75■□□□□ 0.91
USP13Q92995 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
USP13Q92995 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
USP13Q92995 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.74■□□□□ 0.91
USP13Q92995 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
USP13Q92995 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC20.74■□□□□ 0.91
USP13Q92995 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
USP13Q92995 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms