Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
TM9SF4Q92544 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TM9SF4Q92544 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
TM9SF4Q92544 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.72■□□□□ 0.59
TM9SF4Q92544 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TM9SF4Q92544 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC18.72■□□□□ 0.59
TM9SF4Q92544 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TM9SF4Q92544 RER1-204ENST00000378518 522 ntTSL 3 BASIC18.72■□□□□ 0.59
TM9SF4Q92544 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC18.72■□□□□ 0.59
TM9SF4Q92544 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TM9SF4Q92544 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC18.72■□□□□ 0.59
TM9SF4Q92544 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC18.72■□□□□ 0.59
TM9SF4Q92544 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
TM9SF4Q92544 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TM9SF4Q92544 Z99916.2-201ENST00000604037 246 ntBASIC18.72■□□□□ 0.59
TM9SF4Q92544 AL356652.1-201ENST00000615962 565 ntBASIC18.72■□□□□ 0.59
TM9SF4Q92544 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TM9SF4Q92544 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TM9SF4Q92544 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
TM9SF4Q92544 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
TM9SF4Q92544 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TM9SF4Q92544 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TM9SF4Q92544 KRT17P2-201ENST00000300992 1314 ntBASIC18.72■□□□□ 0.59
TM9SF4Q92544 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
TM9SF4Q92544 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.71■□□□□ 0.59
TM9SF4Q92544 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
TM9SF4Q92544 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TM9SF4Q92544 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC18.71■□□□□ 0.59
TM9SF4Q92544 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TM9SF4Q92544 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TM9SF4Q92544 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
TM9SF4Q92544 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TM9SF4Q92544 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
TM9SF4Q92544 MDFI-202ENST00000373050 809 ntTSL 2 BASIC18.71■□□□□ 0.59
TM9SF4Q92544 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TM9SF4Q92544 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC18.71■□□□□ 0.59
TM9SF4Q92544 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
TM9SF4Q92544 AC120498.8-201ENST00000614275 531 ntBASIC18.71■□□□□ 0.59
TM9SF4Q92544 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC18.71■□□□□ 0.59
TM9SF4Q92544 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.71■□□□□ 0.59
TM9SF4Q92544 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TM9SF4Q92544 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TM9SF4Q92544 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
TM9SF4Q92544 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TM9SF4Q92544 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TM9SF4Q92544 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC18.71■□□□□ 0.59
TM9SF4Q92544 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
TM9SF4Q92544 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
TM9SF4Q92544 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC18.7■□□□□ 0.58
TM9SF4Q92544 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TM9SF4Q92544 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.7■□□□□ 0.58
TM9SF4Q92544 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TM9SF4Q92544 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TM9SF4Q92544 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC18.7■□□□□ 0.58
TM9SF4Q92544 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC18.7■□□□□ 0.58
TM9SF4Q92544 AC133681.1-201ENST00000465482 601 ntBASIC18.7■□□□□ 0.58
TM9SF4Q92544 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC18.7■□□□□ 0.58
TM9SF4Q92544 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC18.7■□□□□ 0.58
TM9SF4Q92544 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TM9SF4Q92544 MTDHP1-201ENST00000605323 784 ntBASIC18.7■□□□□ 0.58
TM9SF4Q92544 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TM9SF4Q92544 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TM9SF4Q92544 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC18.7■□□□□ 0.58
TM9SF4Q92544 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
TM9SF4Q92544 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TM9SF4Q92544 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TM9SF4Q92544 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
TM9SF4Q92544 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TM9SF4Q92544 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TM9SF4Q92544 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TM9SF4Q92544 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TM9SF4Q92544 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC18.69■□□□□ 0.58
TM9SF4Q92544 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TM9SF4Q92544 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
TM9SF4Q92544 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TM9SF4Q92544 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.69■□□□□ 0.58
TM9SF4Q92544 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TM9SF4Q92544 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TM9SF4Q92544 GXYLT1P3-201ENST00000453058 1193 ntBASIC18.69■□□□□ 0.58
TM9SF4Q92544 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC18.69■□□□□ 0.58
TM9SF4Q92544 THEM4-205ENST00000489410 643 ntTSL 2 BASIC18.69■□□□□ 0.58
TM9SF4Q92544 LY6E-205ENST00000519611 635 ntTSL 3 BASIC18.69■□□□□ 0.58
TM9SF4Q92544 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
TM9SF4Q92544 PRKY-204ENST00000533551 1019 ntBASIC18.69■□□□□ 0.58
TM9SF4Q92544 AC233702.5-201ENST00000584107 538 ntBASIC18.69■□□□□ 0.58
TM9SF4Q92544 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TM9SF4Q92544 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TM9SF4Q92544 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.69■□□□□ 0.58
TM9SF4Q92544 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TM9SF4Q92544 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC18.69■□□□□ 0.58
TM9SF4Q92544 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TM9SF4Q92544 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TM9SF4Q92544 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TM9SF4Q92544 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC18.69■□□□□ 0.58
TM9SF4Q92544 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TM9SF4Q92544 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
TM9SF4Q92544 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC18.69■□□□□ 0.58
TM9SF4Q92544 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
TM9SF4Q92544 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TM9SF4Q92544 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms