Protein–RNA interactions for Protein: Q8WVD3

RNF138, E3 ubiquitin-protein ligase RNF138, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF138Q8WVD3 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC18.02■□□□□ 0.47
RNF138Q8WVD3 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
RNF138Q8WVD3 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
RNF138Q8WVD3 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RNF138Q8WVD3 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RNF138Q8WVD3 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RNF138Q8WVD3 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.01■□□□□ 0.47
RNF138Q8WVD3 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
RNF138Q8WVD3 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RNF138Q8WVD3 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
RNF138Q8WVD3 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
RNF138Q8WVD3 AC239809.2-201ENST00000415381 517 ntBASIC18.01■□□□□ 0.47
RNF138Q8WVD3 YBX1P10-201ENST00000444752 975 ntBASIC18.01■□□□□ 0.47
RNF138Q8WVD3 F2R-202ENST00000505600 442 ntTSL 2 BASIC18.01■□□□□ 0.47
RNF138Q8WVD3 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RNF138Q8WVD3 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
RNF138Q8WVD3 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC18.01■□□□□ 0.47
RNF138Q8WVD3 AL023875.1-201ENST00000640777 796 ntBASIC18.01■□□□□ 0.47
RNF138Q8WVD3 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RNF138Q8WVD3 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RNF138Q8WVD3 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RNF138Q8WVD3 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC18.01■□□□□ 0.47
RNF138Q8WVD3 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RNF138Q8WVD3 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RNF138Q8WVD3 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
RNF138Q8WVD3 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RNF138Q8WVD3 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RNF138Q8WVD3 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
RNF138Q8WVD3 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
RNF138Q8WVD3 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
RNF138Q8WVD3 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18■□□□□ 0.47
RNF138Q8WVD3 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
RNF138Q8WVD3 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18■□□□□ 0.47
RNF138Q8WVD3 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RNF138Q8WVD3 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
RNF138Q8WVD3 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RNF138Q8WVD3 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC18■□□□□ 0.47
RNF138Q8WVD3 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
RNF138Q8WVD3 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
RNF138Q8WVD3 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC18■□□□□ 0.47
RNF138Q8WVD3 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC18■□□□□ 0.47
RNF138Q8WVD3 RHOD-202ENST00000532559 538 ntTSL 3 BASIC18■□□□□ 0.47
RNF138Q8WVD3 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC18■□□□□ 0.47
RNF138Q8WVD3 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RNF138Q8WVD3 NBPF21P-201ENST00000425093 1451 ntBASIC18■□□□□ 0.47
RNF138Q8WVD3 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC18■□□□□ 0.47
RNF138Q8WVD3 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RNF138Q8WVD3 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC18■□□□□ 0.47
RNF138Q8WVD3 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18■□□□□ 0.47
RNF138Q8WVD3 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
RNF138Q8WVD3 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RNF138Q8WVD3 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RNF138Q8WVD3 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC17.99■□□□□ 0.47
RNF138Q8WVD3 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC17.99■□□□□ 0.47
RNF138Q8WVD3 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC17.99■□□□□ 0.47
RNF138Q8WVD3 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC17.99■□□□□ 0.47
RNF138Q8WVD3 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
RNF138Q8WVD3 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC17.99■□□□□ 0.47
RNF138Q8WVD3 AP006587.1-201ENST00000534129 1502 ntBASIC17.99■□□□□ 0.47
RNF138Q8WVD3 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RNF138Q8WVD3 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RNF138Q8WVD3 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
RNF138Q8WVD3 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RNF138Q8WVD3 KRASP1-201ENST00000407852 552 ntBASIC17.99■□□□□ 0.47
RNF138Q8WVD3 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC17.99■□□□□ 0.47
RNF138Q8WVD3 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RNF138Q8WVD3 KRT18P16-201ENST00000510337 1294 ntBASIC17.99■□□□□ 0.47
RNF138Q8WVD3 C1QBPP2-201ENST00000528754 825 ntBASIC17.99■□□□□ 0.47
RNF138Q8WVD3 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC17.99■□□□□ 0.47
RNF138Q8WVD3 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC17.99■□□□□ 0.47
RNF138Q8WVD3 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC17.99■□□□□ 0.47
RNF138Q8WVD3 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC17.99■□□□□ 0.47
RNF138Q8WVD3 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RNF138Q8WVD3 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
RNF138Q8WVD3 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC17.99■□□□□ 0.47
RNF138Q8WVD3 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC17.99■□□□□ 0.47
RNF138Q8WVD3 LBX2-AS1-202ENST00000603175 2083 ntBASIC17.99■□□□□ 0.47
RNF138Q8WVD3 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RNF138Q8WVD3 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
RNF138Q8WVD3 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC17.98■□□□□ 0.47
RNF138Q8WVD3 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC17.98■□□□□ 0.47
RNF138Q8WVD3 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC17.98■□□□□ 0.47
RNF138Q8WVD3 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RNF138Q8WVD3 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RNF138Q8WVD3 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
RNF138Q8WVD3 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RNF138Q8WVD3 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC17.98■□□□□ 0.47
RNF138Q8WVD3 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
RNF138Q8WVD3 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC17.98■□□□□ 0.47
RNF138Q8WVD3 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RNF138Q8WVD3 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC17.98■□□□□ 0.47
RNF138Q8WVD3 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC17.98■□□□□ 0.47
RNF138Q8WVD3 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC17.98■□□□□ 0.47
RNF138Q8WVD3 AC110285.5-201ENST00000611501 352 ntBASIC17.98■□□□□ 0.47
RNF138Q8WVD3 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
RNF138Q8WVD3 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RNF138Q8WVD3 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
RNF138Q8WVD3 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RNF138Q8WVD3 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
RNF138Q8WVD3 AC112907.3-201ENST00000577781 2400 ntBASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms