Protein–RNA interactions for Protein: Q8NHY2

RFWD2, E3 ubiquitin-protein ligase RFWD2, humanhuman

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2Q8NHY2 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
RFWD2Q8NHY2 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
RFWD2Q8NHY2 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RFWD2Q8NHY2 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.58■□□□□ 0.72
RFWD2Q8NHY2 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RFWD2Q8NHY2 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC19.58■□□□□ 0.72
RFWD2Q8NHY2 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
RFWD2Q8NHY2 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RFWD2Q8NHY2 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
RFWD2Q8NHY2 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RFWD2Q8NHY2 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC19.57■□□□□ 0.72
RFWD2Q8NHY2 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RFWD2Q8NHY2 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
RFWD2Q8NHY2 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RFWD2Q8NHY2 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RFWD2Q8NHY2 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
RFWD2Q8NHY2 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
RFWD2Q8NHY2 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RFWD2Q8NHY2 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RFWD2Q8NHY2 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
RFWD2Q8NHY2 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC19.57■□□□□ 0.72
RFWD2Q8NHY2 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
RFWD2Q8NHY2 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
RFWD2Q8NHY2 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
RFWD2Q8NHY2 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
RFWD2Q8NHY2 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC19.56■□□□□ 0.72
RFWD2Q8NHY2 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.56■□□□□ 0.72
RFWD2Q8NHY2 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
RFWD2Q8NHY2 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC19.56■□□□□ 0.72
RFWD2Q8NHY2 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.56■□□□□ 0.72
RFWD2Q8NHY2 AL138781.2-201ENST00000617896 1843 ntBASIC19.56■□□□□ 0.72
RFWD2Q8NHY2 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RFWD2Q8NHY2 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RFWD2Q8NHY2 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RFWD2Q8NHY2 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
RFWD2Q8NHY2 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
RFWD2Q8NHY2 AC138907.5-202ENST00000569484 235 ntBASIC19.56■□□□□ 0.72
RFWD2Q8NHY2 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
RFWD2Q8NHY2 MIR6084-201ENST00000622012 110 ntBASIC19.56■□□□□ 0.72
RFWD2Q8NHY2 LINC01465-201ENST00000408887 1940 ntBASIC19.56■□□□□ 0.72
RFWD2Q8NHY2 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
RFWD2Q8NHY2 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RFWD2Q8NHY2 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RFWD2Q8NHY2 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
RFWD2Q8NHY2 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RFWD2Q8NHY2 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19.55■□□□□ 0.72
RFWD2Q8NHY2 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RFWD2Q8NHY2 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.55■□□□□ 0.72
RFWD2Q8NHY2 MPST-204ENST00000404393 1329 ntTSL 5 BASIC19.55■□□□□ 0.72
RFWD2Q8NHY2 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
RFWD2Q8NHY2 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
RFWD2Q8NHY2 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RFWD2Q8NHY2 IRS3P-201ENST00000223076 1006 ntBASIC19.55■□□□□ 0.72
RFWD2Q8NHY2 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RFWD2Q8NHY2 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RFWD2Q8NHY2 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RFWD2Q8NHY2 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RFWD2Q8NHY2 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
RFWD2Q8NHY2 NME4-202ENST00000382940 766 ntTSL 3 BASIC19.55■□□□□ 0.72
RFWD2Q8NHY2 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RFWD2Q8NHY2 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC19.55■□□□□ 0.72
RFWD2Q8NHY2 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC19.55■□□□□ 0.72
RFWD2Q8NHY2 AC012414.1-201ENST00000556676 535 ntBASIC19.55■□□□□ 0.72
RFWD2Q8NHY2 NME4-211ENST00000620944 1193 ntTSL 2 BASIC19.55■□□□□ 0.72
RFWD2Q8NHY2 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RFWD2Q8NHY2 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.55■□□□□ 0.72
RFWD2Q8NHY2 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RFWD2Q8NHY2 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RFWD2Q8NHY2 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC19.54■□□□□ 0.72
RFWD2Q8NHY2 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RFWD2Q8NHY2 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RFWD2Q8NHY2 KRT87P-202ENST00000534226 1464 ntBASIC19.54■□□□□ 0.72
RFWD2Q8NHY2 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
RFWD2Q8NHY2 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC19.54■□□□□ 0.72
RFWD2Q8NHY2 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
RFWD2Q8NHY2 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC19.54■□□□□ 0.72
RFWD2Q8NHY2 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RFWD2Q8NHY2 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
RFWD2Q8NHY2 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.54■□□□□ 0.72
RFWD2Q8NHY2 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.54■□□□□ 0.72
RFWD2Q8NHY2 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC19.54■□□□□ 0.72
RFWD2Q8NHY2 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC19.54■□□□□ 0.72
RFWD2Q8NHY2 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
RFWD2Q8NHY2 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RFWD2Q8NHY2 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.54■□□□□ 0.72
RFWD2Q8NHY2 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RFWD2Q8NHY2 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RFWD2Q8NHY2 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RFWD2Q8NHY2 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RFWD2Q8NHY2 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
RFWD2Q8NHY2 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
RFWD2Q8NHY2 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
RFWD2Q8NHY2 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RFWD2Q8NHY2 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RFWD2Q8NHY2 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RFWD2Q8NHY2 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC19.54■□□□□ 0.72
RFWD2Q8NHY2 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
RFWD2Q8NHY2 AC009237.14-201ENST00000609975 1594 ntBASIC19.53■□□□□ 0.72
RFWD2Q8NHY2 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
RFWD2Q8NHY2 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms