Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC17.37■□□□□ 0.37
CPEB3Q8NE35 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.37■□□□□ 0.37
CPEB3Q8NE35 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CPEB3Q8NE35 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CPEB3Q8NE35 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC17.36■□□□□ 0.37
CPEB3Q8NE35 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CPEB3Q8NE35 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC17.36■□□□□ 0.37
CPEB3Q8NE35 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC17.36■□□□□ 0.37
CPEB3Q8NE35 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CPEB3Q8NE35 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CPEB3Q8NE35 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
CPEB3Q8NE35 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CPEB3Q8NE35 AL390719.1-204ENST00000412397 1219 ntBASIC17.36■□□□□ 0.37
CPEB3Q8NE35 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC17.36■□□□□ 0.37
CPEB3Q8NE35 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CPEB3Q8NE35 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC17.36■□□□□ 0.37
CPEB3Q8NE35 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CPEB3Q8NE35 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC17.36■□□□□ 0.37
CPEB3Q8NE35 REXO2-208ENST00000539754 791 ntTSL 2 BASIC17.36■□□□□ 0.37
CPEB3Q8NE35 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC17.36■□□□□ 0.37
CPEB3Q8NE35 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CPEB3Q8NE35 AC006557.6-201ENST00000623071 864 ntBASIC17.36■□□□□ 0.37
CPEB3Q8NE35 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
CPEB3Q8NE35 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CPEB3Q8NE35 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CPEB3Q8NE35 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CPEB3Q8NE35 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CPEB3Q8NE35 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC17.36■□□□□ 0.37
CPEB3Q8NE35 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC17.36■□□□□ 0.37
CPEB3Q8NE35 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
CPEB3Q8NE35 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
CPEB3Q8NE35 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CPEB3Q8NE35 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CPEB3Q8NE35 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC17.36■□□□□ 0.37
CPEB3Q8NE35 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC17.35■□□□□ 0.37
CPEB3Q8NE35 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
CPEB3Q8NE35 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC17.35■□□□□ 0.37
CPEB3Q8NE35 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CPEB3Q8NE35 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CPEB3Q8NE35 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CPEB3Q8NE35 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CPEB3Q8NE35 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CPEB3Q8NE35 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC17.35■□□□□ 0.37
CPEB3Q8NE35 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC17.35■□□□□ 0.37
CPEB3Q8NE35 HES2-206ENST00000489730 730 ntTSL 2 BASIC17.35■□□□□ 0.37
CPEB3Q8NE35 SLC29A4P2-201ENST00000504749 1089 ntBASIC17.35■□□□□ 0.37
CPEB3Q8NE35 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CPEB3Q8NE35 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
CPEB3Q8NE35 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC17.35■□□□□ 0.37
CPEB3Q8NE35 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CPEB3Q8NE35 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CPEB3Q8NE35 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CPEB3Q8NE35 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CPEB3Q8NE35 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CPEB3Q8NE35 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CPEB3Q8NE35 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CPEB3Q8NE35 MOK-225ENST00000522867 1883 ntTSL 5 BASIC17.35■□□□□ 0.37
CPEB3Q8NE35 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CPEB3Q8NE35 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CPEB3Q8NE35 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CPEB3Q8NE35 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CPEB3Q8NE35 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CPEB3Q8NE35 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
CPEB3Q8NE35 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
CPEB3Q8NE35 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CPEB3Q8NE35 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CPEB3Q8NE35 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CPEB3Q8NE35 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CPEB3Q8NE35 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC17.34■□□□□ 0.37
CPEB3Q8NE35 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CPEB3Q8NE35 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC17.34■□□□□ 0.37
CPEB3Q8NE35 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CPEB3Q8NE35 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC17.34■□□□□ 0.37
CPEB3Q8NE35 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC17.34■□□□□ 0.37
CPEB3Q8NE35 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CPEB3Q8NE35 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC17.34■□□□□ 0.37
CPEB3Q8NE35 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC17.34■□□□□ 0.37
CPEB3Q8NE35 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CPEB3Q8NE35 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CPEB3Q8NE35 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CPEB3Q8NE35 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC17.34■□□□□ 0.37
CPEB3Q8NE35 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC17.34■□□□□ 0.37
CPEB3Q8NE35 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC17.34■□□□□ 0.37
CPEB3Q8NE35 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC17.34■□□□□ 0.37
CPEB3Q8NE35 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC17.34■□□□□ 0.37
CPEB3Q8NE35 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CPEB3Q8NE35 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC17.33■□□□□ 0.37
CPEB3Q8NE35 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CPEB3Q8NE35 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC17.33■□□□□ 0.37
CPEB3Q8NE35 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CPEB3Q8NE35 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CPEB3Q8NE35 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CPEB3Q8NE35 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CPEB3Q8NE35 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CPEB3Q8NE35 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
CPEB3Q8NE35 RER1-204ENST00000378518 522 ntTSL 3 BASIC17.33■□□□□ 0.36
CPEB3Q8NE35 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC17.33■□□□□ 0.36
CPEB3Q8NE35 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC17.33■□□□□ 0.36
CPEB3Q8NE35 KRT18P6-201ENST00000555540 1265 ntBASIC17.33■□□□□ 0.36
CPEB3Q8NE35 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms