Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC16.51■□□□□ 0.23
CCDC71LQ8N9Z2 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
CCDC71LQ8N9Z2 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
CCDC71LQ8N9Z2 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC71LQ8N9Z2 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC71LQ8N9Z2 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC16.51■□□□□ 0.23
CCDC71LQ8N9Z2 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC71LQ8N9Z2 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC71LQ8N9Z2 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC71LQ8N9Z2 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC71LQ8N9Z2 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
CCDC71LQ8N9Z2 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC71LQ8N9Z2 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC71LQ8N9Z2 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
CCDC71LQ8N9Z2 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC71LQ8N9Z2 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC16.5■□□□□ 0.23
CCDC71LQ8N9Z2 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC71LQ8N9Z2 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC16.5■□□□□ 0.23
CCDC71LQ8N9Z2 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC71LQ8N9Z2 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC71LQ8N9Z2 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC16.5■□□□□ 0.23
CCDC71LQ8N9Z2 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC71LQ8N9Z2 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC16.5■□□□□ 0.23
CCDC71LQ8N9Z2 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC16.5■□□□□ 0.23
CCDC71LQ8N9Z2 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC71LQ8N9Z2 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC16.5■□□□□ 0.23
CCDC71LQ8N9Z2 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC16.5■□□□□ 0.23
CCDC71LQ8N9Z2 CCDC92B-201ENST00000575506 885 ntBASIC16.5■□□□□ 0.23
CCDC71LQ8N9Z2 AC243732.1-201ENST00000612648 864 ntBASIC16.5■□□□□ 0.23
CCDC71LQ8N9Z2 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC16.5■□□□□ 0.23
CCDC71LQ8N9Z2 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
CCDC71LQ8N9Z2 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
CCDC71LQ8N9Z2 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC16.5■□□□□ 0.23
CCDC71LQ8N9Z2 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
CCDC71LQ8N9Z2 AC009237.14-201ENST00000609975 1594 ntBASIC16.5■□□□□ 0.23
CCDC71LQ8N9Z2 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC71LQ8N9Z2 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC71LQ8N9Z2 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
CCDC71LQ8N9Z2 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC16.5■□□□□ 0.23
CCDC71LQ8N9Z2 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC16.49■□□□□ 0.23
CCDC71LQ8N9Z2 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC71LQ8N9Z2 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC16.49■□□□□ 0.23
CCDC71LQ8N9Z2 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC16.49■□□□□ 0.23
CCDC71LQ8N9Z2 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC16.49■□□□□ 0.23
CCDC71LQ8N9Z2 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC16.49■□□□□ 0.23
CCDC71LQ8N9Z2 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC16.49■□□□□ 0.23
CCDC71LQ8N9Z2 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC16.49■□□□□ 0.23
CCDC71LQ8N9Z2 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
CCDC71LQ8N9Z2 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC16.49■□□□□ 0.23
CCDC71LQ8N9Z2 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC71LQ8N9Z2 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC71LQ8N9Z2 SAPCD2P1-201ENST00000395413 1184 ntBASIC16.49■□□□□ 0.23
CCDC71LQ8N9Z2 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
CCDC71LQ8N9Z2 AC091799.1-201ENST00000422823 811 ntBASIC16.49■□□□□ 0.23
CCDC71LQ8N9Z2 AC097381.1-201ENST00000429019 1296 ntBASIC16.49■□□□□ 0.23
CCDC71LQ8N9Z2 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
CCDC71LQ8N9Z2 CDV3P1-201ENST00000471403 739 ntBASIC16.49■□□□□ 0.23
CCDC71LQ8N9Z2 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC16.49■□□□□ 0.23
CCDC71LQ8N9Z2 SLC7A5P2-201ENST00000553010 536 ntBASIC16.49■□□□□ 0.23
CCDC71LQ8N9Z2 AF213884.3-201ENST00000563833 479 ntBASIC16.49■□□□□ 0.23
CCDC71LQ8N9Z2 AC106739.1-201ENST00000617035 715 ntBASIC16.49■□□□□ 0.23
CCDC71LQ8N9Z2 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC16.49■□□□□ 0.23
CCDC71LQ8N9Z2 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC71LQ8N9Z2 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC71LQ8N9Z2 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC16.49■□□□□ 0.23
CCDC71LQ8N9Z2 PWWP2AP1-201ENST00000429776 2273 ntBASIC16.49■□□□□ 0.23
CCDC71LQ8N9Z2 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
CCDC71LQ8N9Z2 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC71LQ8N9Z2 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC71LQ8N9Z2 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC71LQ8N9Z2 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC71LQ8N9Z2 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
CCDC71LQ8N9Z2 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC71LQ8N9Z2 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
CCDC71LQ8N9Z2 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC16.48■□□□□ 0.23
CCDC71LQ8N9Z2 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC71LQ8N9Z2 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC71LQ8N9Z2 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC71LQ8N9Z2 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC71LQ8N9Z2 MIR939-201ENST00000401314 82 ntBASIC16.48■□□□□ 0.23
CCDC71LQ8N9Z2 KRT18P20-201ENST00000548986 1279 ntBASIC16.48■□□□□ 0.23
CCDC71LQ8N9Z2 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC16.48■□□□□ 0.23
CCDC71LQ8N9Z2 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC16.48■□□□□ 0.23
CCDC71LQ8N9Z2 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC71LQ8N9Z2 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC71LQ8N9Z2 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC71LQ8N9Z2 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC71LQ8N9Z2 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC71LQ8N9Z2 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC16.48■□□□□ 0.23
CCDC71LQ8N9Z2 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC71LQ8N9Z2 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC16.48■□□□□ 0.23
CCDC71LQ8N9Z2 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC71LQ8N9Z2 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC71LQ8N9Z2 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC71LQ8N9Z2 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC71LQ8N9Z2 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC71LQ8N9Z2 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC16.47■□□□□ 0.23
CCDC71LQ8N9Z2 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC71LQ8N9Z2 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC71LQ8N9Z2 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms