Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC21.51■■□□□ 1.03
VPS52Q8N1B4 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC21.51■■□□□ 1.03
VPS52Q8N1B4 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC21.51■■□□□ 1.03
VPS52Q8N1B4 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
VPS52Q8N1B4 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC21.51■■□□□ 1.03
VPS52Q8N1B4 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
VPS52Q8N1B4 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
VPS52Q8N1B4 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
VPS52Q8N1B4 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
VPS52Q8N1B4 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC21.5■■□□□ 1.03
VPS52Q8N1B4 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC21.5■■□□□ 1.03
VPS52Q8N1B4 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
VPS52Q8N1B4 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
VPS52Q8N1B4 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
VPS52Q8N1B4 KRT8P36-201ENST00000489121 1440 ntBASIC21.5■■□□□ 1.03
VPS52Q8N1B4 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC21.5■■□□□ 1.03
VPS52Q8N1B4 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
VPS52Q8N1B4 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC21.5■■□□□ 1.03
VPS52Q8N1B4 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC21.5■■□□□ 1.03
VPS52Q8N1B4 AC010331.1-201ENST00000611423 582 ntBASIC21.5■■□□□ 1.03
VPS52Q8N1B4 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC21.5■■□□□ 1.03
VPS52Q8N1B4 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
VPS52Q8N1B4 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
VPS52Q8N1B4 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC21.5■■□□□ 1.03
VPS52Q8N1B4 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
VPS52Q8N1B4 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
VPS52Q8N1B4 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
VPS52Q8N1B4 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
VPS52Q8N1B4 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
VPS52Q8N1B4 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
VPS52Q8N1B4 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
VPS52Q8N1B4 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC21.49■■□□□ 1.03
VPS52Q8N1B4 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC21.49■■□□□ 1.03
VPS52Q8N1B4 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
VPS52Q8N1B4 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
VPS52Q8N1B4 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
VPS52Q8N1B4 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC21.49■■□□□ 1.03
VPS52Q8N1B4 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
VPS52Q8N1B4 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
VPS52Q8N1B4 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
VPS52Q8N1B4 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
VPS52Q8N1B4 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
VPS52Q8N1B4 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC21.49■■□□□ 1.03
VPS52Q8N1B4 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
VPS52Q8N1B4 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC21.49■■□□□ 1.03
VPS52Q8N1B4 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC21.49■■□□□ 1.03
VPS52Q8N1B4 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
VPS52Q8N1B4 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
VPS52Q8N1B4 MIR2861-201ENST00000636310 90 ntBASIC21.49■■□□□ 1.03
VPS52Q8N1B4 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC21.49■■□□□ 1.03
VPS52Q8N1B4 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC21.49■■□□□ 1.03
VPS52Q8N1B4 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
VPS52Q8N1B4 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC21.49■■□□□ 1.03
VPS52Q8N1B4 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
VPS52Q8N1B4 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
VPS52Q8N1B4 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
VPS52Q8N1B4 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
VPS52Q8N1B4 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
VPS52Q8N1B4 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
VPS52Q8N1B4 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
VPS52Q8N1B4 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
VPS52Q8N1B4 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC21.48■■□□□ 1.03
VPS52Q8N1B4 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
VPS52Q8N1B4 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
VPS52Q8N1B4 SAPCD2P4-201ENST00000424595 1171 ntBASIC21.48■■□□□ 1.03
VPS52Q8N1B4 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC21.48■■□□□ 1.03
VPS52Q8N1B4 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC21.48■■□□□ 1.03
VPS52Q8N1B4 AC026471.5-201ENST00000615068 467 ntBASIC21.48■■□□□ 1.03
VPS52Q8N1B4 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC21.48■■□□□ 1.03
VPS52Q8N1B4 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
VPS52Q8N1B4 HTR7P1-201ENST00000538670 1336 ntBASIC21.48■■□□□ 1.03
VPS52Q8N1B4 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
VPS52Q8N1B4 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
VPS52Q8N1B4 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
VPS52Q8N1B4 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
VPS52Q8N1B4 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
VPS52Q8N1B4 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
VPS52Q8N1B4 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
VPS52Q8N1B4 KRT16P5-201ENST00000455284 522 ntBASIC21.47■■□□□ 1.03
VPS52Q8N1B4 AF186192.3-201ENST00000583427 947 ntBASIC21.47■■□□□ 1.03
VPS52Q8N1B4 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
VPS52Q8N1B4 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
VPS52Q8N1B4 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
VPS52Q8N1B4 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC21.47■■□□□ 1.03
VPS52Q8N1B4 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
VPS52Q8N1B4 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
VPS52Q8N1B4 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
VPS52Q8N1B4 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC21.47■■□□□ 1.03
VPS52Q8N1B4 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC21.47■■□□□ 1.03
VPS52Q8N1B4 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC21.47■■□□□ 1.03
VPS52Q8N1B4 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
VPS52Q8N1B4 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC21.46■■□□□ 1.03
VPS52Q8N1B4 NBPF21P-201ENST00000425093 1451 ntBASIC21.46■■□□□ 1.03
VPS52Q8N1B4 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
VPS52Q8N1B4 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC21.46■■□□□ 1.03
VPS52Q8N1B4 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
VPS52Q8N1B4 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC21.46■■□□□ 1.03
VPS52Q8N1B4 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
VPS52Q8N1B4 AP003071.4-201ENST00000562276 1284 ntBASIC21.46■■□□□ 1.03
VPS52Q8N1B4 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC21.46■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms