Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC71Q8IV32 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC71Q8IV32 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC71Q8IV32 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC18.56■□□□□ 0.56
CCDC71Q8IV32 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC18.56■□□□□ 0.56
CCDC71Q8IV32 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC71Q8IV32 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC18.56■□□□□ 0.56
CCDC71Q8IV32 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC18.56■□□□□ 0.56
CCDC71Q8IV32 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC71Q8IV32 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC71Q8IV32 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC18.56■□□□□ 0.56
CCDC71Q8IV32 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.56■□□□□ 0.56
CCDC71Q8IV32 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC71Q8IV32 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC71Q8IV32 OR2A1-AS1-201ENST00000462305 773 ntBASIC18.56■□□□□ 0.56
CCDC71Q8IV32 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC18.56■□□□□ 0.56
CCDC71Q8IV32 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC18.56■□□□□ 0.56
CCDC71Q8IV32 PBX1-209ENST00000485769 834 ntTSL 2 BASIC18.56■□□□□ 0.56
CCDC71Q8IV32 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC18.56■□□□□ 0.56
CCDC71Q8IV32 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC18.56■□□□□ 0.56
CCDC71Q8IV32 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC18.56■□□□□ 0.56
CCDC71Q8IV32 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC18.56■□□□□ 0.56
CCDC71Q8IV32 AL162412.1-201ENST00000567129 965 ntBASIC18.56■□□□□ 0.56
CCDC71Q8IV32 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC71Q8IV32 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC18.56■□□□□ 0.56
CCDC71Q8IV32 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC71Q8IV32 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.56■□□□□ 0.56
CCDC71Q8IV32 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC71Q8IV32 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC71Q8IV32 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC71Q8IV32 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18.56■□□□□ 0.56
CCDC71Q8IV32 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC71Q8IV32 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC71Q8IV32 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.56■□□□□ 0.56
CCDC71Q8IV32 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC71Q8IV32 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC71Q8IV32 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC71Q8IV32 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC71Q8IV32 POLI-202ENST00000406285 2030 ntTSL 2 BASIC18.56■□□□□ 0.56
CCDC71Q8IV32 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC71Q8IV32 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC71Q8IV32 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC71Q8IV32 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC18.55■□□□□ 0.56
CCDC71Q8IV32 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC71Q8IV32 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.55■□□□□ 0.56
CCDC71Q8IV32 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC18.55■□□□□ 0.56
CCDC71Q8IV32 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC71Q8IV32 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC18.55■□□□□ 0.56
CCDC71Q8IV32 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC18.55■□□□□ 0.56
CCDC71Q8IV32 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC71Q8IV32 AC243732.1-201ENST00000612648 864 ntBASIC18.55■□□□□ 0.56
CCDC71Q8IV32 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC71Q8IV32 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC71Q8IV32 AC005332.7-201ENST00000614046 2005 ntBASIC18.55■□□□□ 0.56
CCDC71Q8IV32 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC71Q8IV32 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
CCDC71Q8IV32 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC71Q8IV32 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.55■□□□□ 0.56
CCDC71Q8IV32 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC71Q8IV32 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.55■□□□□ 0.56
CCDC71Q8IV32 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC71Q8IV32 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.55■□□□□ 0.56
CCDC71Q8IV32 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.55■□□□□ 0.56
CCDC71Q8IV32 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.55■□□□□ 0.56
CCDC71Q8IV32 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC71Q8IV32 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC71Q8IV32 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
CCDC71Q8IV32 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC71Q8IV32 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC71Q8IV32 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC71Q8IV32 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.54■□□□□ 0.56
CCDC71Q8IV32 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC71Q8IV32 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC71Q8IV32 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC71Q8IV32 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
CCDC71Q8IV32 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC18.54■□□□□ 0.56
CCDC71Q8IV32 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC71Q8IV32 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC18.54■□□□□ 0.56
CCDC71Q8IV32 RPS2P52-201ENST00000469610 820 ntBASIC18.54■□□□□ 0.56
CCDC71Q8IV32 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC18.54■□□□□ 0.56
CCDC71Q8IV32 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC18.54■□□□□ 0.56
CCDC71Q8IV32 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC71Q8IV32 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.54■□□□□ 0.56
CCDC71Q8IV32 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC71Q8IV32 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC18.54■□□□□ 0.56
CCDC71Q8IV32 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18.54■□□□□ 0.56
CCDC71Q8IV32 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC71Q8IV32 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC71Q8IV32 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC71Q8IV32 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC71Q8IV32 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
CCDC71Q8IV32 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC18.53■□□□□ 0.56
CCDC71Q8IV32 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC18.53■□□□□ 0.56
CCDC71Q8IV32 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
CCDC71Q8IV32 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC71Q8IV32 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
CCDC71Q8IV32 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC71Q8IV32 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
CCDC71Q8IV32 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
CCDC71Q8IV32 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms