Protein–RNA interactions for Protein: Q71F78

LCA10, Putative lung carcinoma-associated protein 10, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCA10Q71F78 AC073314.1-201ENST00000568729 2216 ntBASIC10.69□□□□□ -0.7
LCA10Q71F78 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC10.69□□□□□ -0.7
LCA10Q71F78 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC10.69□□□□□ -0.7
LCA10Q71F78 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC10.69□□□□□ -0.7
LCA10Q71F78 VGF-203ENST00000611537 1622 ntTSL 5 BASIC10.69□□□□□ -0.7
LCA10Q71F78 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
LCA10Q71F78 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
LCA10Q71F78 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC10.69□□□□□ -0.7
LCA10Q71F78 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
LCA10Q71F78 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
LCA10Q71F78 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC10.68□□□□□ -0.7
LCA10Q71F78 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC10.68□□□□□ -0.7
LCA10Q71F78 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC10.68□□□□□ -0.7
LCA10Q71F78 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
LCA10Q71F78 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
LCA10Q71F78 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC10.68□□□□□ -0.7
LCA10Q71F78 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
LCA10Q71F78 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
LCA10Q71F78 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
LCA10Q71F78 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC10.68□□□□□ -0.7
LCA10Q71F78 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
LCA10Q71F78 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC10.68□□□□□ -0.7
LCA10Q71F78 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
LCA10Q71F78 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC10.68□□□□□ -0.7
LCA10Q71F78 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
LCA10Q71F78 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
LCA10Q71F78 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
LCA10Q71F78 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
LCA10Q71F78 Z92544.1-202ENST00000571933 1220 ntBASIC10.68□□□□□ -0.7
LCA10Q71F78 MIR4787-201ENST00000607364 84 ntBASIC10.68□□□□□ -0.7
LCA10Q71F78 EXOG-217ENST00000630638 197 ntTSL 5 BASIC10.68□□□□□ -0.7
LCA10Q71F78 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
LCA10Q71F78 AL390961.4-201ENST00000623958 2535 ntBASIC10.68□□□□□ -0.7
LCA10Q71F78 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
LCA10Q71F78 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
LCA10Q71F78 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
LCA10Q71F78 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC10.68□□□□□ -0.7
LCA10Q71F78 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC10.68□□□□□ -0.7
LCA10Q71F78 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
LCA10Q71F78 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
LCA10Q71F78 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
LCA10Q71F78 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
LCA10Q71F78 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC10.68□□□□□ -0.7
LCA10Q71F78 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
LCA10Q71F78 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
LCA10Q71F78 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC10.68□□□□□ -0.7
LCA10Q71F78 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
LCA10Q71F78 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
LCA10Q71F78 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
LCA10Q71F78 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC10.68□□□□□ -0.7
LCA10Q71F78 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
LCA10Q71F78 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC10.67□□□□□ -0.7
LCA10Q71F78 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC10.67□□□□□ -0.7
LCA10Q71F78 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LCA10Q71F78 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
LCA10Q71F78 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
LCA10Q71F78 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LCA10Q71F78 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LCA10Q71F78 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LCA10Q71F78 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LCA10Q71F78 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
LCA10Q71F78 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC10.67□□□□□ -0.7
LCA10Q71F78 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
LCA10Q71F78 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC10.67□□□□□ -0.7
LCA10Q71F78 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC10.67□□□□□ -0.7
LCA10Q71F78 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LCA10Q71F78 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC10.67□□□□□ -0.7
LCA10Q71F78 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
LCA10Q71F78 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC10.67□□□□□ -0.7
LCA10Q71F78 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LCA10Q71F78 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LCA10Q71F78 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC10.67□□□□□ -0.7
LCA10Q71F78 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
LCA10Q71F78 AC010997.5-201ENST00000609182 354 ntBASIC10.67□□□□□ -0.7
LCA10Q71F78 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LCA10Q71F78 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC10.67□□□□□ -0.7
LCA10Q71F78 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
LCA10Q71F78 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
LCA10Q71F78 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC10.67□□□□□ -0.7
LCA10Q71F78 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LCA10Q71F78 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
LCA10Q71F78 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
LCA10Q71F78 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LCA10Q71F78 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC10.67□□□□□ -0.7
LCA10Q71F78 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LCA10Q71F78 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
LCA10Q71F78 TUB-203ENST00000534099 1759 ntTSL 2 BASIC10.67□□□□□ -0.7
LCA10Q71F78 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
LCA10Q71F78 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC10.67□□□□□ -0.7
LCA10Q71F78 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
LCA10Q71F78 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LCA10Q71F78 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
LCA10Q71F78 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC10.66□□□□□ -0.7
LCA10Q71F78 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
LCA10Q71F78 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC10.66□□□□□ -0.7
LCA10Q71F78 AL162727.3-201ENST00000635661 2787 ntBASIC10.66□□□□□ -0.7
LCA10Q71F78 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC10.66□□□□□ -0.7
LCA10Q71F78 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
LCA10Q71F78 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
LCA10Q71F78 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms