Protein–RNA interactions for Protein: Q5VTA0

PRAMEF17, PRAME family member 17, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF17Q5VTA0 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PRAMEF17Q5VTA0 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
PRAMEF17Q5VTA0 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
PRAMEF17Q5VTA0 CABP2-204ENST00000636477 941 ntTSL 5 BASIC18.93■□□□□ 0.62
PRAMEF17Q5VTA0 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PRAMEF17Q5VTA0 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC18.93■□□□□ 0.62
PRAMEF17Q5VTA0 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.93■□□□□ 0.62
PRAMEF17Q5VTA0 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
PRAMEF17Q5VTA0 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PRAMEF17Q5VTA0 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
PRAMEF17Q5VTA0 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
PRAMEF17Q5VTA0 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PRAMEF17Q5VTA0 NBPF21P-201ENST00000425093 1451 ntBASIC18.92■□□□□ 0.62
PRAMEF17Q5VTA0 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PRAMEF17Q5VTA0 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PRAMEF17Q5VTA0 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PRAMEF17Q5VTA0 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PRAMEF17Q5VTA0 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
PRAMEF17Q5VTA0 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
PRAMEF17Q5VTA0 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC18.92■□□□□ 0.62
PRAMEF17Q5VTA0 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC18.92■□□□□ 0.62
PRAMEF17Q5VTA0 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
PRAMEF17Q5VTA0 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
PRAMEF17Q5VTA0 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PRAMEF17Q5VTA0 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PRAMEF17Q5VTA0 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.92■□□□□ 0.62
PRAMEF17Q5VTA0 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
PRAMEF17Q5VTA0 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PRAMEF17Q5VTA0 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC18.92■□□□□ 0.62
PRAMEF17Q5VTA0 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PRAMEF17Q5VTA0 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
PRAMEF17Q5VTA0 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PRAMEF17Q5VTA0 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PRAMEF17Q5VTA0 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC18.91■□□□□ 0.62
PRAMEF17Q5VTA0 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
PRAMEF17Q5VTA0 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.91■□□□□ 0.62
PRAMEF17Q5VTA0 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC18.91■□□□□ 0.62
PRAMEF17Q5VTA0 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
PRAMEF17Q5VTA0 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PRAMEF17Q5VTA0 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PRAMEF17Q5VTA0 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PRAMEF17Q5VTA0 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PRAMEF17Q5VTA0 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PRAMEF17Q5VTA0 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PRAMEF17Q5VTA0 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
PRAMEF17Q5VTA0 AC012618.2-201ENST00000428058 849 ntBASIC18.91■□□□□ 0.62
PRAMEF17Q5VTA0 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PRAMEF17Q5VTA0 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PRAMEF17Q5VTA0 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC18.91■□□□□ 0.62
PRAMEF17Q5VTA0 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PRAMEF17Q5VTA0 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
PRAMEF17Q5VTA0 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
PRAMEF17Q5VTA0 AL049637.2-201ENST00000641778 930 ntBASIC18.91■□□□□ 0.62
PRAMEF17Q5VTA0 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC18.91■□□□□ 0.62
PRAMEF17Q5VTA0 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.91■□□□□ 0.62
PRAMEF17Q5VTA0 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC18.91■□□□□ 0.62
PRAMEF17Q5VTA0 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PRAMEF17Q5VTA0 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PRAMEF17Q5VTA0 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
PRAMEF17Q5VTA0 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PRAMEF17Q5VTA0 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC18.91■□□□□ 0.62
PRAMEF17Q5VTA0 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PRAMEF17Q5VTA0 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18.9■□□□□ 0.62
PRAMEF17Q5VTA0 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PRAMEF17Q5VTA0 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PRAMEF17Q5VTA0 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PRAMEF17Q5VTA0 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PRAMEF17Q5VTA0 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PRAMEF17Q5VTA0 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PRAMEF17Q5VTA0 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PRAMEF17Q5VTA0 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC18.9■□□□□ 0.62
PRAMEF17Q5VTA0 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
PRAMEF17Q5VTA0 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC18.9■□□□□ 0.62
PRAMEF17Q5VTA0 AL121906.2-201ENST00000621597 723 ntBASIC18.9■□□□□ 0.62
PRAMEF17Q5VTA0 AC113410.3-201ENST00000623366 203 ntBASIC18.9■□□□□ 0.62
PRAMEF17Q5VTA0 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC18.9■□□□□ 0.62
PRAMEF17Q5VTA0 MED17-221ENST00000639724 2317 ntTSL 5 BASIC18.9■□□□□ 0.62
PRAMEF17Q5VTA0 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.9■□□□□ 0.62
PRAMEF17Q5VTA0 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PRAMEF17Q5VTA0 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC18.89■□□□□ 0.62
PRAMEF17Q5VTA0 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
PRAMEF17Q5VTA0 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC18.89■□□□□ 0.62
PRAMEF17Q5VTA0 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC18.89■□□□□ 0.61
PRAMEF17Q5VTA0 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PRAMEF17Q5VTA0 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
PRAMEF17Q5VTA0 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PRAMEF17Q5VTA0 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PRAMEF17Q5VTA0 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PRAMEF17Q5VTA0 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PRAMEF17Q5VTA0 TSPY15P-201ENST00000457163 923 ntBASIC18.89■□□□□ 0.61
PRAMEF17Q5VTA0 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC18.89■□□□□ 0.61
PRAMEF17Q5VTA0 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC18.89■□□□□ 0.61
PRAMEF17Q5VTA0 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC18.89■□□□□ 0.61
PRAMEF17Q5VTA0 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC18.89■□□□□ 0.61
PRAMEF17Q5VTA0 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
PRAMEF17Q5VTA0 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC18.89■□□□□ 0.61
PRAMEF17Q5VTA0 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
PRAMEF17Q5VTA0 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PRAMEF17Q5VTA0 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
PRAMEF17Q5VTA0 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms