Protein–RNA interactions for Protein: Q5SW96

LDLRAP1, Low density lipoprotein receptor adapter protein 1, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1Q5SW96 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
LDLRAP1Q5SW96 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LDLRAP1Q5SW96 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LDLRAP1Q5SW96 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
LDLRAP1Q5SW96 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC19.73■□□□□ 0.75
LDLRAP1Q5SW96 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC19.73■□□□□ 0.75
LDLRAP1Q5SW96 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC19.73■□□□□ 0.75
LDLRAP1Q5SW96 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC19.73■□□□□ 0.75
LDLRAP1Q5SW96 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LDLRAP1Q5SW96 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
LDLRAP1Q5SW96 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
LDLRAP1Q5SW96 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LDLRAP1Q5SW96 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LDLRAP1Q5SW96 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC19.73■□□□□ 0.75
LDLRAP1Q5SW96 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.73■□□□□ 0.75
LDLRAP1Q5SW96 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
LDLRAP1Q5SW96 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
LDLRAP1Q5SW96 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LDLRAP1Q5SW96 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LDLRAP1Q5SW96 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LDLRAP1Q5SW96 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LDLRAP1Q5SW96 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC19.72■□□□□ 0.75
LDLRAP1Q5SW96 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LDLRAP1Q5SW96 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LDLRAP1Q5SW96 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
LDLRAP1Q5SW96 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC19.72■□□□□ 0.75
LDLRAP1Q5SW96 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC19.72■□□□□ 0.75
LDLRAP1Q5SW96 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LDLRAP1Q5SW96 POU5F1P3-201ENST00000428824 1078 ntBASIC19.72■□□□□ 0.75
LDLRAP1Q5SW96 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC19.72■□□□□ 0.75
LDLRAP1Q5SW96 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
LDLRAP1Q5SW96 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC19.72■□□□□ 0.75
LDLRAP1Q5SW96 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
LDLRAP1Q5SW96 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
LDLRAP1Q5SW96 MAX-217ENST00000557277 728 ntTSL 3 BASIC19.72■□□□□ 0.75
LDLRAP1Q5SW96 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC19.72■□□□□ 0.75
LDLRAP1Q5SW96 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
LDLRAP1Q5SW96 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
LDLRAP1Q5SW96 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
LDLRAP1Q5SW96 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
LDLRAP1Q5SW96 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
LDLRAP1Q5SW96 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
LDLRAP1Q5SW96 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.72■□□□□ 0.75
LDLRAP1Q5SW96 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
LDLRAP1Q5SW96 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LDLRAP1Q5SW96 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LDLRAP1Q5SW96 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
LDLRAP1Q5SW96 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
LDLRAP1Q5SW96 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.71■□□□□ 0.75
LDLRAP1Q5SW96 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LDLRAP1Q5SW96 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LDLRAP1Q5SW96 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
LDLRAP1Q5SW96 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
LDLRAP1Q5SW96 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LDLRAP1Q5SW96 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.71■□□□□ 0.75
LDLRAP1Q5SW96 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LDLRAP1Q5SW96 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.71■□□□□ 0.75
LDLRAP1Q5SW96 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
LDLRAP1Q5SW96 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LDLRAP1Q5SW96 KRT17P3-201ENST00000420566 1262 ntBASIC19.71■□□□□ 0.75
LDLRAP1Q5SW96 POM121L13P-201ENST00000422362 380 ntBASIC19.71■□□□□ 0.75
LDLRAP1Q5SW96 FAM201B-201ENST00000458407 597 ntBASIC19.71■□□□□ 0.75
LDLRAP1Q5SW96 RPS2P52-201ENST00000469610 820 ntBASIC19.71■□□□□ 0.75
LDLRAP1Q5SW96 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC19.71■□□□□ 0.75
LDLRAP1Q5SW96 ADM-205ENST00000528544 586 ntTSL 2 BASIC19.71■□□□□ 0.75
LDLRAP1Q5SW96 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC19.71■□□□□ 0.75
LDLRAP1Q5SW96 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC19.71■□□□□ 0.75
LDLRAP1Q5SW96 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC19.71■□□□□ 0.75
LDLRAP1Q5SW96 KLF2-202ENST00000592003 564 ntTSL 3 BASIC19.71■□□□□ 0.75
LDLRAP1Q5SW96 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.71■□□□□ 0.75
LDLRAP1Q5SW96 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
LDLRAP1Q5SW96 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
LDLRAP1Q5SW96 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LDLRAP1Q5SW96 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LDLRAP1Q5SW96 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
LDLRAP1Q5SW96 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
LDLRAP1Q5SW96 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LDLRAP1Q5SW96 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LDLRAP1Q5SW96 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC19.7■□□□□ 0.74
LDLRAP1Q5SW96 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.7■□□□□ 0.74
LDLRAP1Q5SW96 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LDLRAP1Q5SW96 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.7■□□□□ 0.74
LDLRAP1Q5SW96 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC19.7■□□□□ 0.74
LDLRAP1Q5SW96 TSPY20P-201ENST00000450910 630 ntBASIC19.7■□□□□ 0.74
LDLRAP1Q5SW96 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC19.7■□□□□ 0.74
LDLRAP1Q5SW96 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC19.7■□□□□ 0.74
LDLRAP1Q5SW96 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC19.7■□□□□ 0.74
LDLRAP1Q5SW96 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
LDLRAP1Q5SW96 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
LDLRAP1Q5SW96 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
LDLRAP1Q5SW96 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC19.7■□□□□ 0.74
LDLRAP1Q5SW96 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
LDLRAP1Q5SW96 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LDLRAP1Q5SW96 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.69■□□□□ 0.74
LDLRAP1Q5SW96 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
LDLRAP1Q5SW96 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.69■□□□□ 0.74
LDLRAP1Q5SW96 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
LDLRAP1Q5SW96 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
LDLRAP1Q5SW96 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
LDLRAP1Q5SW96 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms