Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
USH1GQ495M9 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC22.81■■□□□ 1.24
USH1GQ495M9 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC22.81■■□□□ 1.24
USH1GQ495M9 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
USH1GQ495M9 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
USH1GQ495M9 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
USH1GQ495M9 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC22.81■■□□□ 1.24
USH1GQ495M9 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
USH1GQ495M9 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
USH1GQ495M9 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
USH1GQ495M9 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
USH1GQ495M9 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC22.81■■□□□ 1.24
USH1GQ495M9 AL135905.2-201ENST00000584934 1404 ntBASIC22.81■■□□□ 1.24
USH1GQ495M9 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
USH1GQ495M9 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC22.81■■□□□ 1.24
USH1GQ495M9 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC22.81■■□□□ 1.24
USH1GQ495M9 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC22.8■■□□□ 1.24
USH1GQ495M9 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC22.8■■□□□ 1.24
USH1GQ495M9 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC22.8■■□□□ 1.24
USH1GQ495M9 AP005212.1-201ENST00000581547 1997 ntBASIC22.8■■□□□ 1.24
USH1GQ495M9 AC092667.1-201ENST00000434301 2586 ntBASIC22.8■■□□□ 1.24
USH1GQ495M9 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
USH1GQ495M9 STK25-204ENST00000405585 1643 ntTSL 2 BASIC22.8■■□□□ 1.24
USH1GQ495M9 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
USH1GQ495M9 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC22.8■■□□□ 1.24
USH1GQ495M9 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
USH1GQ495M9 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC22.8■■□□□ 1.24
USH1GQ495M9 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC22.8■■□□□ 1.24
USH1GQ495M9 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC22.8■■□□□ 1.24
USH1GQ495M9 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
USH1GQ495M9 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC22.8■■□□□ 1.24
USH1GQ495M9 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC22.8■■□□□ 1.24
USH1GQ495M9 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC22.8■■□□□ 1.24
USH1GQ495M9 AC113410.3-201ENST00000623366 203 ntBASIC22.8■■□□□ 1.24
USH1GQ495M9 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC22.8■■□□□ 1.24
USH1GQ495M9 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
USH1GQ495M9 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
USH1GQ495M9 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
USH1GQ495M9 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC22.8■■□□□ 1.24
USH1GQ495M9 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
USH1GQ495M9 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
USH1GQ495M9 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
USH1GQ495M9 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
USH1GQ495M9 AC018553.1-201ENST00000616682 1458 ntBASIC22.79■■□□□ 1.24
USH1GQ495M9 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC22.79■■□□□ 1.24
USH1GQ495M9 AL512408.1-201ENST00000569378 2000 ntBASIC22.79■■□□□ 1.24
USH1GQ495M9 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
USH1GQ495M9 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC22.79■■□□□ 1.24
USH1GQ495M9 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
USH1GQ495M9 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
USH1GQ495M9 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
USH1GQ495M9 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
USH1GQ495M9 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC22.79■■□□□ 1.24
USH1GQ495M9 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC22.79■■□□□ 1.24
USH1GQ495M9 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC22.79■■□□□ 1.24
USH1GQ495M9 AC004264.1-201ENST00000608354 794 ntBASIC22.79■■□□□ 1.24
USH1GQ495M9 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC22.79■■□□□ 1.24
USH1GQ495M9 AL391422.3-201ENST00000603791 2761 ntBASIC22.79■■□□□ 1.24
USH1GQ495M9 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC22.79■■□□□ 1.24
USH1GQ495M9 FEM1AP1-201ENST00000431297 1995 ntBASIC22.79■■□□□ 1.24
USH1GQ495M9 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC22.79■■□□□ 1.24
USH1GQ495M9 AC116351.2-201ENST00000606540 1585 ntBASIC22.79■■□□□ 1.24
USH1GQ495M9 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC22.79■■□□□ 1.24
USH1GQ495M9 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC22.79■■□□□ 1.24
USH1GQ495M9 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
USH1GQ495M9 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
USH1GQ495M9 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC22.78■■□□□ 1.24
USH1GQ495M9 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
USH1GQ495M9 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC22.78■■□□□ 1.24
USH1GQ495M9 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC22.78■■□□□ 1.24
USH1GQ495M9 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
USH1GQ495M9 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC22.78■■□□□ 1.24
USH1GQ495M9 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
USH1GQ495M9 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC22.78■■□□□ 1.24
USH1GQ495M9 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
USH1GQ495M9 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
USH1GQ495M9 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
USH1GQ495M9 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
USH1GQ495M9 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC22.78■■□□□ 1.24
USH1GQ495M9 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
USH1GQ495M9 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
USH1GQ495M9 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC22.78■■□□□ 1.24
USH1GQ495M9 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC22.78■■□□□ 1.24
USH1GQ495M9 PHGDH-210ENST00000641115 1638 ntBASIC22.78■■□□□ 1.24
USH1GQ495M9 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC22.78■■□□□ 1.24
USH1GQ495M9 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
USH1GQ495M9 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC22.77■■□□□ 1.24
USH1GQ495M9 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC22.77■■□□□ 1.24
USH1GQ495M9 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
USH1GQ495M9 BX119927.1-201ENST00000636596 1552 ntBASIC22.77■■□□□ 1.24
USH1GQ495M9 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC22.77■■□□□ 1.24
USH1GQ495M9 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
USH1GQ495M9 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC22.77■■□□□ 1.24
USH1GQ495M9 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC22.77■■□□□ 1.24
USH1GQ495M9 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC22.77■■□□□ 1.24
USH1GQ495M9 ARL16-209ENST00000573715 763 ntTSL 3 BASIC22.77■■□□□ 1.24
USH1GQ495M9 ARL16-211ENST00000576135 694 ntTSL 3 BASIC22.77■■□□□ 1.24
USH1GQ495M9 AP001412.1-201ENST00000608405 714 ntBASIC22.77■■□□□ 1.24
USH1GQ495M9 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC22.77■■□□□ 1.24
USH1GQ495M9 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC22.77■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms