Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
CTC1Q2NKJ3 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CTC1Q2NKJ3 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
CTC1Q2NKJ3 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC21.26■□□□□ 0.99
CTC1Q2NKJ3 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
CTC1Q2NKJ3 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CTC1Q2NKJ3 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CTC1Q2NKJ3 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC21.26■□□□□ 0.99
CTC1Q2NKJ3 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC21.26■□□□□ 0.99
CTC1Q2NKJ3 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC21.26■□□□□ 0.99
CTC1Q2NKJ3 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CTC1Q2NKJ3 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC21.26■□□□□ 0.99
CTC1Q2NKJ3 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
CTC1Q2NKJ3 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
CTC1Q2NKJ3 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC21.26■□□□□ 0.99
CTC1Q2NKJ3 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CTC1Q2NKJ3 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC21.26■□□□□ 0.99
CTC1Q2NKJ3 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
CTC1Q2NKJ3 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CTC1Q2NKJ3 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
CTC1Q2NKJ3 AC124283.5-201ENST00000624661 1809 ntBASIC21.25■□□□□ 0.99
CTC1Q2NKJ3 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CTC1Q2NKJ3 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
CTC1Q2NKJ3 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CTC1Q2NKJ3 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC21.25■□□□□ 0.99
CTC1Q2NKJ3 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC21.25■□□□□ 0.99
CTC1Q2NKJ3 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CTC1Q2NKJ3 AL390955.1-201ENST00000428694 934 ntBASIC21.25■□□□□ 0.99
CTC1Q2NKJ3 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC21.25■□□□□ 0.99
CTC1Q2NKJ3 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CTC1Q2NKJ3 AP002982.1-201ENST00000492365 877 ntBASIC21.25■□□□□ 0.99
CTC1Q2NKJ3 TMA16-209ENST00000513272 803 ntTSL 2 BASIC21.25■□□□□ 0.99
CTC1Q2NKJ3 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC21.25■□□□□ 0.99
CTC1Q2NKJ3 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CTC1Q2NKJ3 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC21.24■□□□□ 0.99
CTC1Q2NKJ3 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CTC1Q2NKJ3 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
CTC1Q2NKJ3 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
CTC1Q2NKJ3 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC21.24■□□□□ 0.99
CTC1Q2NKJ3 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC21.24■□□□□ 0.99
CTC1Q2NKJ3 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC21.24■□□□□ 0.99
CTC1Q2NKJ3 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC21.24■□□□□ 0.99
CTC1Q2NKJ3 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
CTC1Q2NKJ3 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC21.24■□□□□ 0.99
CTC1Q2NKJ3 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC21.24■□□□□ 0.99
CTC1Q2NKJ3 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
CTC1Q2NKJ3 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC21.24■□□□□ 0.99
CTC1Q2NKJ3 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CTC1Q2NKJ3 EXOC3-AS1-202ENST00000623673 1663 ntBASIC21.24■□□□□ 0.99
CTC1Q2NKJ3 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CTC1Q2NKJ3 ME2-206ENST00000638410 2289 ntTSL 5 BASIC21.24■□□□□ 0.99
CTC1Q2NKJ3 ME2-210ENST00000639255 2262 ntTSL 5 BASIC21.24■□□□□ 0.99
CTC1Q2NKJ3 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CTC1Q2NKJ3 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC21.23■□□□□ 0.99
CTC1Q2NKJ3 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CTC1Q2NKJ3 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC21.23■□□□□ 0.99
CTC1Q2NKJ3 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC21.23■□□□□ 0.99
CTC1Q2NKJ3 LTBR-211ENST00000543190 785 ntTSL 3 BASIC21.23■□□□□ 0.99
CTC1Q2NKJ3 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC21.23■□□□□ 0.99
CTC1Q2NKJ3 AC004264.1-201ENST00000608354 794 ntBASIC21.23■□□□□ 0.99
CTC1Q2NKJ3 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC21.23■□□□□ 0.99
CTC1Q2NKJ3 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC21.23■□□□□ 0.99
CTC1Q2NKJ3 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC21.23■□□□□ 0.99
CTC1Q2NKJ3 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CTC1Q2NKJ3 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
CTC1Q2NKJ3 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CTC1Q2NKJ3 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC21.23■□□□□ 0.99
CTC1Q2NKJ3 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC21.23■□□□□ 0.99
CTC1Q2NKJ3 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CTC1Q2NKJ3 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC21.23■□□□□ 0.99
CTC1Q2NKJ3 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CTC1Q2NKJ3 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
CTC1Q2NKJ3 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CTC1Q2NKJ3 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CTC1Q2NKJ3 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC21.22■□□□□ 0.99
CTC1Q2NKJ3 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CTC1Q2NKJ3 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC21.22■□□□□ 0.99
CTC1Q2NKJ3 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CTC1Q2NKJ3 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CTC1Q2NKJ3 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
CTC1Q2NKJ3 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
CTC1Q2NKJ3 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CTC1Q2NKJ3 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CTC1Q2NKJ3 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CTC1Q2NKJ3 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC21.22■□□□□ 0.99
CTC1Q2NKJ3 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CTC1Q2NKJ3 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC21.22■□□□□ 0.99
CTC1Q2NKJ3 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CTC1Q2NKJ3 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC21.22■□□□□ 0.99
CTC1Q2NKJ3 AC087388.1-201ENST00000571370 1112 ntBASIC21.22■□□□□ 0.99
CTC1Q2NKJ3 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC21.22■□□□□ 0.99
CTC1Q2NKJ3 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC21.22■□□□□ 0.99
CTC1Q2NKJ3 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
CTC1Q2NKJ3 TUB-203ENST00000534099 1759 ntTSL 2 BASIC21.22■□□□□ 0.99
CTC1Q2NKJ3 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CTC1Q2NKJ3 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CTC1Q2NKJ3 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CTC1Q2NKJ3 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CTC1Q2NKJ3 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CTC1Q2NKJ3 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms