Protein–RNA interactions for Protein: Q16563

SYPL1, Synaptophysin-like protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1Q16563 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.46■□□□□ 0.55
SYPL1Q16563 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.46■□□□□ 0.55
SYPL1Q16563 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC18.46■□□□□ 0.55
SYPL1Q16563 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SYPL1Q16563 LSM12P1-201ENST00000411836 588 ntBASIC18.46■□□□□ 0.55
SYPL1Q16563 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC18.46■□□□□ 0.55
SYPL1Q16563 HES2-205ENST00000487437 968 ntTSL 3 BASIC18.46■□□□□ 0.55
SYPL1Q16563 PHB2-213ENST00000546111 858 ntTSL 2 BASIC18.46■□□□□ 0.55
SYPL1Q16563 AC105036.2-201ENST00000569468 176 ntBASIC18.46■□□□□ 0.55
SYPL1Q16563 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC18.46■□□□□ 0.55
SYPL1Q16563 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC18.46■□□□□ 0.55
SYPL1Q16563 AL137784.2-201ENST00000607332 1000 ntBASIC18.46■□□□□ 0.55
SYPL1Q16563 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
SYPL1Q16563 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SYPL1Q16563 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
SYPL1Q16563 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC18.46■□□□□ 0.55
SYPL1Q16563 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC18.46■□□□□ 0.55
SYPL1Q16563 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
SYPL1Q16563 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
SYPL1Q16563 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SYPL1Q16563 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC18.45■□□□□ 0.54
SYPL1Q16563 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SYPL1Q16563 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SYPL1Q16563 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
SYPL1Q16563 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
SYPL1Q16563 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC18.45■□□□□ 0.54
SYPL1Q16563 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
SYPL1Q16563 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SYPL1Q16563 GLI3-203ENST00000437480 451 ntTSL 2 BASIC18.45■□□□□ 0.54
SYPL1Q16563 AC023632.3-201ENST00000521633 145 ntBASIC18.45■□□□□ 0.54
SYPL1Q16563 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
SYPL1Q16563 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
SYPL1Q16563 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SYPL1Q16563 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SYPL1Q16563 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
SYPL1Q16563 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
SYPL1Q16563 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
SYPL1Q16563 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SYPL1Q16563 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SYPL1Q16563 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SYPL1Q16563 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
SYPL1Q16563 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
SYPL1Q16563 MKRN4P-201ENST00000444706 1521 ntBASIC18.44■□□□□ 0.54
SYPL1Q16563 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.44■□□□□ 0.54
SYPL1Q16563 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
SYPL1Q16563 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.44■□□□□ 0.54
SYPL1Q16563 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SYPL1Q16563 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
SYPL1Q16563 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SYPL1Q16563 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SYPL1Q16563 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SYPL1Q16563 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SYPL1Q16563 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SYPL1Q16563 MIR663A-201ENST00000385250 93 ntBASIC18.44■□□□□ 0.54
SYPL1Q16563 AC026185.1-201ENST00000445748 174 ntBASIC18.44■□□□□ 0.54
SYPL1Q16563 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC18.44■□□□□ 0.54
SYPL1Q16563 AF201337.1-201ENST00000520239 748 ntBASIC18.44■□□□□ 0.54
SYPL1Q16563 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC18.44■□□□□ 0.54
SYPL1Q16563 RAP2CP1-201ENST00000605103 478 ntBASIC18.44■□□□□ 0.54
SYPL1Q16563 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SYPL1Q16563 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SYPL1Q16563 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC18.44■□□□□ 0.54
SYPL1Q16563 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SYPL1Q16563 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SYPL1Q16563 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SYPL1Q16563 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC18.44■□□□□ 0.54
SYPL1Q16563 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
SYPL1Q16563 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SYPL1Q16563 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
SYPL1Q16563 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.44■□□□□ 0.54
SYPL1Q16563 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18.43■□□□□ 0.54
SYPL1Q16563 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.43■□□□□ 0.54
SYPL1Q16563 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SYPL1Q16563 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SYPL1Q16563 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18.43■□□□□ 0.54
SYPL1Q16563 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SYPL1Q16563 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC18.43■□□□□ 0.54
SYPL1Q16563 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SYPL1Q16563 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SYPL1Q16563 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC18.43■□□□□ 0.54
SYPL1Q16563 AC093484.2-201ENST00000580996 2166 ntBASIC18.43■□□□□ 0.54
SYPL1Q16563 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SYPL1Q16563 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC18.43■□□□□ 0.54
SYPL1Q16563 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SYPL1Q16563 DLX3-202ENST00000512495 834 ntTSL 2 BASIC18.43■□□□□ 0.54
SYPL1Q16563 VPS53-216ENST00000574029 585 ntTSL 4 BASIC18.43■□□□□ 0.54
SYPL1Q16563 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SYPL1Q16563 MARS-234ENST00000630571 216 ntTSL 5 BASIC18.43■□□□□ 0.54
SYPL1Q16563 MARS-235ENST00000630803 183 ntTSL 3 BASIC18.43■□□□□ 0.54
SYPL1Q16563 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
SYPL1Q16563 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SYPL1Q16563 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SYPL1Q16563 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
SYPL1Q16563 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC18.43■□□□□ 0.54
SYPL1Q16563 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
SYPL1Q16563 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
SYPL1Q16563 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SYPL1Q16563 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
SYPL1Q16563 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SYPL1Q16563 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 66.6 ms