Protein–RNA interactions for Protein: P83110

HTRA3, Serine protease HTRA3, humanhuman

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTRA3P83110 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
HTRA3P83110 AP002383.4-201ENST00000442518 975 ntBASIC23.26■■□□□ 1.31
HTRA3P83110 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC23.26■■□□□ 1.31
HTRA3P83110 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
HTRA3P83110 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC23.26■■□□□ 1.31
HTRA3P83110 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
HTRA3P83110 HLA-A-201ENST00000376802 1334 ntBASIC23.26■■□□□ 1.31
HTRA3P83110 KRT18P1-202ENST00000452408 1331 ntBASIC23.26■■□□□ 1.31
HTRA3P83110 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
HTRA3P83110 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC23.26■■□□□ 1.31
HTRA3P83110 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
HTRA3P83110 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
HTRA3P83110 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC23.25■■□□□ 1.31
HTRA3P83110 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC23.25■■□□□ 1.31
HTRA3P83110 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
HTRA3P83110 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
HTRA3P83110 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC23.25■■□□□ 1.31
HTRA3P83110 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC23.25■■□□□ 1.31
HTRA3P83110 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC23.25■■□□□ 1.31
HTRA3P83110 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC23.25■■□□□ 1.31
HTRA3P83110 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
HTRA3P83110 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
HTRA3P83110 AL353719.1-201ENST00000566847 864 ntBASIC23.25■■□□□ 1.31
HTRA3P83110 AL512604.3-201ENST00000569583 964 ntBASIC23.25■■□□□ 1.31
HTRA3P83110 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.31
HTRA3P83110 AL139424.1-201ENST00000607572 797 ntBASIC23.25■■□□□ 1.31
HTRA3P83110 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC23.25■■□□□ 1.31
HTRA3P83110 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC23.25■■□□□ 1.31
HTRA3P83110 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
HTRA3P83110 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
HTRA3P83110 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
HTRA3P83110 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
HTRA3P83110 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
HTRA3P83110 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
HTRA3P83110 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC23.24■■□□□ 1.31
HTRA3P83110 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
HTRA3P83110 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
HTRA3P83110 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
HTRA3P83110 TSPY19P-201ENST00000418461 509 ntBASIC23.24■■□□□ 1.31
HTRA3P83110 SPDYE15P-201ENST00000424157 909 ntBASIC23.24■■□□□ 1.31
HTRA3P83110 TSPY18P-201ENST00000441642 509 ntBASIC23.24■■□□□ 1.31
HTRA3P83110 NUS1P1-201ENST00000446295 882 ntBASIC23.24■■□□□ 1.31
HTRA3P83110 TSPY17P-201ENST00000450329 467 ntBASIC23.24■■□□□ 1.31
HTRA3P83110 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
HTRA3P83110 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
HTRA3P83110 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
HTRA3P83110 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC23.24■■□□□ 1.31
HTRA3P83110 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
HTRA3P83110 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
HTRA3P83110 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC23.23■■□□□ 1.31
HTRA3P83110 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC23.23■■□□□ 1.31
HTRA3P83110 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC23.23■■□□□ 1.31
HTRA3P83110 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
HTRA3P83110 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
HTRA3P83110 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
HTRA3P83110 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
HTRA3P83110 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC23.23■■□□□ 1.31
HTRA3P83110 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC23.23■■□□□ 1.31
HTRA3P83110 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC23.23■■□□□ 1.31
HTRA3P83110 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC23.23■■□□□ 1.31
HTRA3P83110 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
HTRA3P83110 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC23.23■■□□□ 1.31
HTRA3P83110 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC23.23■■□□□ 1.31
HTRA3P83110 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC23.23■■□□□ 1.31
HTRA3P83110 AC016734.2-201ENST00000624325 1377 ntBASIC23.23■■□□□ 1.31
HTRA3P83110 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
HTRA3P83110 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC23.23■■□□□ 1.31
HTRA3P83110 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC23.22■■□□□ 1.31
HTRA3P83110 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
HTRA3P83110 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
HTRA3P83110 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
HTRA3P83110 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
HTRA3P83110 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
HTRA3P83110 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
HTRA3P83110 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
HTRA3P83110 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
HTRA3P83110 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC23.22■■□□□ 1.31
HTRA3P83110 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC23.22■■□□□ 1.31
HTRA3P83110 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC23.22■■□□□ 1.31
HTRA3P83110 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
HTRA3P83110 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC23.22■■□□□ 1.31
HTRA3P83110 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
HTRA3P83110 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC23.22■■□□□ 1.31
HTRA3P83110 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC23.22■■□□□ 1.31
HTRA3P83110 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
HTRA3P83110 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC23.22■■□□□ 1.31
HTRA3P83110 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
HTRA3P83110 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
HTRA3P83110 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
HTRA3P83110 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC23.22■■□□□ 1.31
HTRA3P83110 TSPY12P-201ENST00000421279 868 ntBASIC23.21■■□□□ 1.31
HTRA3P83110 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC23.21■■□□□ 1.31
HTRA3P83110 CALM3-211ENST00000598871 561 ntTSL 4 BASIC23.21■■□□□ 1.31
HTRA3P83110 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC23.21■■□□□ 1.31
HTRA3P83110 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC23.21■■□□□ 1.31
HTRA3P83110 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC23.21■■□□□ 1.31
HTRA3P83110 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
HTRA3P83110 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
HTRA3P83110 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
HTRA3P83110 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms