Protein–RNA interactions for Protein: P61165

TMEM258, Transmembrane protein 258, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258P61165 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
TMEM258P61165 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
TMEM258P61165 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC11.92□□□□□ -0.5
TMEM258P61165 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
TMEM258P61165 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
TMEM258P61165 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC11.92□□□□□ -0.5
TMEM258P61165 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC11.92□□□□□ -0.5
TMEM258P61165 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
TMEM258P61165 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
TMEM258P61165 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
TMEM258P61165 SNAI3-AS1-205ENST00000568633 2096 ntBASIC11.92□□□□□ -0.5
TMEM258P61165 LINC01960-201ENST00000563759 1884 ntBASIC11.92□□□□□ -0.5
TMEM258P61165 AC006128.1-201ENST00000624704 1661 ntBASIC11.92□□□□□ -0.5
TMEM258P61165 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
TMEM258P61165 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
TMEM258P61165 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
TMEM258P61165 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
TMEM258P61165 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
TMEM258P61165 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
TMEM258P61165 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
TMEM258P61165 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC11.92□□□□□ -0.5
TMEM258P61165 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC11.92□□□□□ -0.5
TMEM258P61165 AL049796.1-201ENST00000565336 1766 ntBASIC11.92□□□□□ -0.5
TMEM258P61165 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC11.92□□□□□ -0.5
TMEM258P61165 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
TMEM258P61165 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
TMEM258P61165 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
TMEM258P61165 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
TMEM258P61165 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC11.91□□□□□ -0.5
TMEM258P61165 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC11.91□□□□□ -0.5
TMEM258P61165 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
TMEM258P61165 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC11.91□□□□□ -0.5
TMEM258P61165 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC11.91□□□□□ -0.5
TMEM258P61165 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
TMEM258P61165 AL512408.1-201ENST00000569378 2000 ntBASIC11.91□□□□□ -0.5
TMEM258P61165 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
TMEM258P61165 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
TMEM258P61165 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC11.91□□□□□ -0.5
TMEM258P61165 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC11.91□□□□□ -0.5
TMEM258P61165 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC11.91□□□□□ -0.5
TMEM258P61165 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
TMEM258P61165 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
TMEM258P61165 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC11.91□□□□□ -0.5
TMEM258P61165 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
TMEM258P61165 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
TMEM258P61165 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC11.91□□□□□ -0.5
TMEM258P61165 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
TMEM258P61165 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
TMEM258P61165 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC11.91□□□□□ -0.5
TMEM258P61165 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
TMEM258P61165 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
TMEM258P61165 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
TMEM258P61165 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
TMEM258P61165 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC11.91□□□□□ -0.5
TMEM258P61165 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC11.91□□□□□ -0.5
TMEM258P61165 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
TMEM258P61165 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
TMEM258P61165 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC11.91□□□□□ -0.5
TMEM258P61165 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
TMEM258P61165 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
TMEM258P61165 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC11.9□□□□□ -0.5
TMEM258P61165 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
TMEM258P61165 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
TMEM258P61165 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC11.9□□□□□ -0.5
TMEM258P61165 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
TMEM258P61165 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
TMEM258P61165 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC11.9□□□□□ -0.5
TMEM258P61165 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
TMEM258P61165 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
TMEM258P61165 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC11.9□□□□□ -0.5
TMEM258P61165 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
TMEM258P61165 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
TMEM258P61165 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
TMEM258P61165 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
TMEM258P61165 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
TMEM258P61165 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC11.9□□□□□ -0.5
TMEM258P61165 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC11.9□□□□□ -0.5
TMEM258P61165 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC11.9□□□□□ -0.5
TMEM258P61165 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
TMEM258P61165 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
TMEM258P61165 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
TMEM258P61165 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC11.9□□□□□ -0.5
TMEM258P61165 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
TMEM258P61165 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
TMEM258P61165 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC11.9□□□□□ -0.5
TMEM258P61165 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
TMEM258P61165 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
TMEM258P61165 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC11.9□□□□□ -0.5
TMEM258P61165 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
TMEM258P61165 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC11.9□□□□□ -0.5
TMEM258P61165 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
TMEM258P61165 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
TMEM258P61165 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.51
TMEM258P61165 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
TMEM258P61165 AC138969.2-201ENST00000532739 9932 ntBASIC11.9□□□□□ -0.51
TMEM258P61165 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC11.9□□□□□ -0.51
TMEM258P61165 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC11.9□□□□□ -0.51
TMEM258P61165 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.51
TMEM258P61165 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
TMEM258P61165 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms