Protein–RNA interactions for Protein: P50607

TUB, Tubby protein homolog, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBP50607 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.89■□□□□ 0.93
TUBP50607 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TUBP50607 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC20.89■□□□□ 0.93
TUBP50607 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.89■□□□□ 0.93
TUBP50607 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TUBP50607 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TUBP50607 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
TUBP50607 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TUBP50607 AC239809.2-201ENST00000415381 517 ntBASIC20.89■□□□□ 0.93
TUBP50607 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC20.89■□□□□ 0.93
TUBP50607 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
TUBP50607 AC124016.1-201ENST00000609552 612 ntBASIC20.89■□□□□ 0.93
TUBP50607 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
TUBP50607 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC20.89■□□□□ 0.93
TUBP50607 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
TUBP50607 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TUBP50607 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC20.89■□□□□ 0.93
TUBP50607 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC20.89■□□□□ 0.93
TUBP50607 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
TUBP50607 AC092720.2-201ENST00000602388 1665 ntBASIC20.89■□□□□ 0.93
TUBP50607 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC20.89■□□□□ 0.93
TUBP50607 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TUBP50607 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC20.88■□□□□ 0.93
TUBP50607 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.88■□□□□ 0.93
TUBP50607 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.88■□□□□ 0.93
TUBP50607 MME-217ENST00000616757 1315 ntTSL 5 BASIC20.88■□□□□ 0.93
TUBP50607 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
TUBP50607 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TUBP50607 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
TUBP50607 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TUBP50607 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TUBP50607 LY6E-205ENST00000519611 635 ntTSL 3 BASIC20.88■□□□□ 0.93
TUBP50607 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC20.88■□□□□ 0.93
TUBP50607 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC20.88■□□□□ 0.93
TUBP50607 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC20.88■□□□□ 0.93
TUBP50607 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC20.88■□□□□ 0.93
TUBP50607 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC20.88■□□□□ 0.93
TUBP50607 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
TUBP50607 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC20.88■□□□□ 0.93
TUBP50607 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TUBP50607 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
TUBP50607 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.88■□□□□ 0.93
TUBP50607 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TUBP50607 LINC01521-201ENST00000504184 1943 ntBASIC20.88■□□□□ 0.93
TUBP50607 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
TUBP50607 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TUBP50607 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.87■□□□□ 0.93
TUBP50607 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TUBP50607 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TUBP50607 FEM1AP1-201ENST00000431297 1995 ntBASIC20.87■□□□□ 0.93
TUBP50607 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TUBP50607 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC20.87■□□□□ 0.93
TUBP50607 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
TUBP50607 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TUBP50607 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
TUBP50607 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC20.87■□□□□ 0.93
TUBP50607 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC20.87■□□□□ 0.93
TUBP50607 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC20.87■□□□□ 0.93
TUBP50607 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC20.87■□□□□ 0.93
TUBP50607 AC008550.1-201ENST00000511500 884 ntBASIC20.87■□□□□ 0.93
TUBP50607 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC20.87■□□□□ 0.93
TUBP50607 AL023875.1-201ENST00000640777 796 ntBASIC20.87■□□□□ 0.93
TUBP50607 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
TUBP50607 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC20.87■□□□□ 0.93
TUBP50607 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
TUBP50607 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC20.87■□□□□ 0.93
TUBP50607 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC20.87■□□□□ 0.93
TUBP50607 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TUBP50607 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.87■□□□□ 0.93
TUBP50607 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.87■□□□□ 0.93
TUBP50607 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TUBP50607 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
TUBP50607 AC073314.1-201ENST00000568729 2216 ntBASIC20.86■□□□□ 0.93
TUBP50607 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TUBP50607 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TUBP50607 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
TUBP50607 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TUBP50607 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
TUBP50607 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TUBP50607 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TUBP50607 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC20.86■□□□□ 0.93
TUBP50607 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC20.86■□□□□ 0.93
TUBP50607 PRKY-204ENST00000533551 1019 ntBASIC20.86■□□□□ 0.93
TUBP50607 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TUBP50607 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC20.86■□□□□ 0.93
TUBP50607 AL121906.2-201ENST00000621597 723 ntBASIC20.86■□□□□ 0.93
TUBP50607 H19-201ENST00000411754 1788 ntTSL 5 BASIC20.86■□□□□ 0.93
TUBP50607 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TUBP50607 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TUBP50607 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TUBP50607 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC20.86■□□□□ 0.93
TUBP50607 KRT8P17-201ENST00000453110 1448 ntBASIC20.86■□□□□ 0.93
TUBP50607 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
TUBP50607 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
TUBP50607 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
TUBP50607 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TUBP50607 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TUBP50607 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TUBP50607 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TUBP50607 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms