Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.18■□□□□ 0.66
SLC6A12P48065 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
SLC6A12P48065 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC6A12P48065 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC6A12P48065 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC6A12P48065 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC19.18■□□□□ 0.66
SLC6A12P48065 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC6A12P48065 AC018553.1-201ENST00000616682 1458 ntBASIC19.18■□□□□ 0.66
SLC6A12P48065 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC19.18■□□□□ 0.66
SLC6A12P48065 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC6A12P48065 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC6A12P48065 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC6A12P48065 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
SLC6A12P48065 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC19.18■□□□□ 0.66
SLC6A12P48065 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
SLC6A12P48065 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC6A12P48065 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SLC6A12P48065 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SLC6A12P48065 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC6A12P48065 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC6A12P48065 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC19.17■□□□□ 0.66
SLC6A12P48065 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SLC6A12P48065 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
SLC6A12P48065 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLC6A12P48065 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC19.17■□□□□ 0.66
SLC6A12P48065 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC19.17■□□□□ 0.66
SLC6A12P48065 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
SLC6A12P48065 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC19.17■□□□□ 0.66
SLC6A12P48065 SLC29A4P2-201ENST00000504749 1089 ntBASIC19.17■□□□□ 0.66
SLC6A12P48065 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC19.17■□□□□ 0.66
SLC6A12P48065 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC19.17■□□□□ 0.66
SLC6A12P48065 AC060766.5-201ENST00000590539 871 ntBASIC19.17■□□□□ 0.66
SLC6A12P48065 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLC6A12P48065 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC19.17■□□□□ 0.66
SLC6A12P48065 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.17■□□□□ 0.66
SLC6A12P48065 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SLC6A12P48065 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SLC6A12P48065 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SLC6A12P48065 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLC6A12P48065 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLC6A12P48065 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.16■□□□□ 0.66
SLC6A12P48065 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SLC6A12P48065 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SLC6A12P48065 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLC6A12P48065 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
SLC6A12P48065 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.16■□□□□ 0.66
SLC6A12P48065 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC19.16■□□□□ 0.66
SLC6A12P48065 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.16■□□□□ 0.66
SLC6A12P48065 AC092368.3-202ENST00000574180 1591 ntBASIC19.16■□□□□ 0.66
SLC6A12P48065 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.16■□□□□ 0.66
SLC6A12P48065 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLC6A12P48065 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SLC6A12P48065 CALM3-202ENST00000391918 702 ntTSL 2 BASIC19.16■□□□□ 0.66
SLC6A12P48065 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC19.16■□□□□ 0.66
SLC6A12P48065 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC19.16■□□□□ 0.66
SLC6A12P48065 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC19.16■□□□□ 0.66
SLC6A12P48065 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SLC6A12P48065 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC19.16■□□□□ 0.66
SLC6A12P48065 AC006557.6-201ENST00000623071 864 ntBASIC19.16■□□□□ 0.66
SLC6A12P48065 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
SLC6A12P48065 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.16■□□□□ 0.66
SLC6A12P48065 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.16■□□□□ 0.66
SLC6A12P48065 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.16■□□□□ 0.66
SLC6A12P48065 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLC6A12P48065 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLC6A12P48065 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLC6A12P48065 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLC6A12P48065 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC19.16■□□□□ 0.66
SLC6A12P48065 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLC6A12P48065 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
SLC6A12P48065 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.16■□□□□ 0.66
SLC6A12P48065 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.15■□□□□ 0.66
SLC6A12P48065 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
SLC6A12P48065 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC19.15■□□□□ 0.66
SLC6A12P48065 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
SLC6A12P48065 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SLC6A12P48065 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SLC6A12P48065 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SLC6A12P48065 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SLC6A12P48065 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
SLC6A12P48065 HLA-L-209ENST00000420110 1011 ntBASIC19.15■□□□□ 0.66
SLC6A12P48065 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC19.15■□□□□ 0.66
SLC6A12P48065 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
SLC6A12P48065 PNMA6B-201ENST00000538162 1200 ntBASIC19.15■□□□□ 0.66
SLC6A12P48065 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC19.15■□□□□ 0.66
SLC6A12P48065 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SLC6A12P48065 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SLC6A12P48065 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SLC6A12P48065 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
SLC6A12P48065 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SLC6A12P48065 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC19.15■□□□□ 0.66
SLC6A12P48065 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC19.15■□□□□ 0.66
SLC6A12P48065 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SLC6A12P48065 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC19.15■□□□□ 0.66
SLC6A12P48065 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
SLC6A12P48065 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SLC6A12P48065 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
SLC6A12P48065 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
SLC6A12P48065 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
SLC6A12P48065 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.14■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms