Protein–RNA interactions for Protein: P43308

SSR2, Translocon-associated protein subunit beta, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR2P43308 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SSR2P43308 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC18.95■□□□□ 0.62
SSR2P43308 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC18.95■□□□□ 0.62
SSR2P43308 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SSR2P43308 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SSR2P43308 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.94■□□□□ 0.62
SSR2P43308 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SSR2P43308 AC092368.3-202ENST00000574180 1591 ntBASIC18.94■□□□□ 0.62
SSR2P43308 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SSR2P43308 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SSR2P43308 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
SSR2P43308 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SSR2P43308 GOLGA2P11-201ENST00000562660 1621 ntBASIC18.94■□□□□ 0.62
SSR2P43308 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SSR2P43308 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SSR2P43308 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC18.94■□□□□ 0.62
SSR2P43308 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC18.94■□□□□ 0.62
SSR2P43308 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
SSR2P43308 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SSR2P43308 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC18.94■□□□□ 0.62
SSR2P43308 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SSR2P43308 AC005829.2-201ENST00000571422 1056 ntBASIC18.94■□□□□ 0.62
SSR2P43308 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SSR2P43308 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SSR2P43308 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
SSR2P43308 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SSR2P43308 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SSR2P43308 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
SSR2P43308 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
SSR2P43308 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SSR2P43308 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SSR2P43308 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SSR2P43308 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SSR2P43308 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SSR2P43308 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SSR2P43308 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SSR2P43308 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SSR2P43308 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SSR2P43308 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SSR2P43308 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SSR2P43308 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC18.93■□□□□ 0.62
SSR2P43308 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC18.93■□□□□ 0.62
SSR2P43308 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC18.93■□□□□ 0.62
SSR2P43308 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC18.93■□□□□ 0.62
SSR2P43308 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SSR2P43308 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SSR2P43308 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SSR2P43308 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC18.93■□□□□ 0.62
SSR2P43308 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SSR2P43308 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SSR2P43308 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
SSR2P43308 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SSR2P43308 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SSR2P43308 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SSR2P43308 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SSR2P43308 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC18.92■□□□□ 0.62
SSR2P43308 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SSR2P43308 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
SSR2P43308 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SSR2P43308 RER1-204ENST00000378518 522 ntTSL 3 BASIC18.92■□□□□ 0.62
SSR2P43308 APTR-205ENST00000447009 902 ntTSL 2 BASIC18.92■□□□□ 0.62
SSR2P43308 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC18.92■□□□□ 0.62
SSR2P43308 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SSR2P43308 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC18.92■□□□□ 0.62
SSR2P43308 AC060766.5-201ENST00000590539 871 ntBASIC18.92■□□□□ 0.62
SSR2P43308 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
SSR2P43308 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SSR2P43308 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.92■□□□□ 0.62
SSR2P43308 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.92■□□□□ 0.62
SSR2P43308 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SSR2P43308 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
SSR2P43308 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.92■□□□□ 0.62
SSR2P43308 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
SSR2P43308 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SSR2P43308 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC18.91■□□□□ 0.62
SSR2P43308 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
SSR2P43308 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SSR2P43308 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.91■□□□□ 0.62
SSR2P43308 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SSR2P43308 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
SSR2P43308 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SSR2P43308 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC18.91■□□□□ 0.62
SSR2P43308 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
SSR2P43308 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC18.91■□□□□ 0.62
SSR2P43308 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SSR2P43308 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC18.91■□□□□ 0.62
SSR2P43308 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC18.91■□□□□ 0.62
SSR2P43308 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
SSR2P43308 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
SSR2P43308 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.91■□□□□ 0.62
SSR2P43308 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SSR2P43308 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.91■□□□□ 0.62
SSR2P43308 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SSR2P43308 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.91■□□□□ 0.62
SSR2P43308 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SSR2P43308 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC18.9■□□□□ 0.62
SSR2P43308 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SSR2P43308 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SSR2P43308 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SSR2P43308 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms