Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SSR1P43307 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SSR1P43307 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SSR1P43307 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
SSR1P43307 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC21.03■□□□□ 0.96
SSR1P43307 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SSR1P43307 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SSR1P43307 BX119927.1-201ENST00000636596 1552 ntBASIC21.03■□□□□ 0.96
SSR1P43307 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC21.03■□□□□ 0.96
SSR1P43307 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
SSR1P43307 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC21.03■□□□□ 0.96
SSR1P43307 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC21.03■□□□□ 0.96
SSR1P43307 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
SSR1P43307 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SSR1P43307 IKBKGP1-201ENST00000612193 1073 ntBASIC21.03■□□□□ 0.96
SSR1P43307 PARP1-210ENST00000629232 477 ntTSL 5 BASIC21.03■□□□□ 0.96
SSR1P43307 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SSR1P43307 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
SSR1P43307 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SSR1P43307 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
SSR1P43307 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
SSR1P43307 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SSR1P43307 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SSR1P43307 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC21.03■□□□□ 0.96
SSR1P43307 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
SSR1P43307 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
SSR1P43307 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
SSR1P43307 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC21.02■□□□□ 0.96
SSR1P43307 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SSR1P43307 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC21.02■□□□□ 0.96
SSR1P43307 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SSR1P43307 GCK-205ENST00000437084 1385 ntTSL 5 BASIC21.02■□□□□ 0.96
SSR1P43307 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SSR1P43307 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SSR1P43307 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SSR1P43307 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SSR1P43307 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
SSR1P43307 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SSR1P43307 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
SSR1P43307 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC21.02■□□□□ 0.96
SSR1P43307 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC21.02■□□□□ 0.96
SSR1P43307 APTR-203ENST00000430801 583 ntTSL 5 BASIC21.02■□□□□ 0.96
SSR1P43307 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC21.02■□□□□ 0.96
SSR1P43307 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SSR1P43307 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC21.02■□□□□ 0.96
SSR1P43307 AC005181.1-201ENST00000604782 1256 ntBASIC21.02■□□□□ 0.96
SSR1P43307 AC105020.6-201ENST00000621523 1217 ntBASIC21.02■□□□□ 0.96
SSR1P43307 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
SSR1P43307 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC21.02■□□□□ 0.96
SSR1P43307 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
SSR1P43307 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SSR1P43307 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC21.02■□□□□ 0.96
SSR1P43307 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SSR1P43307 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC21.02■□□□□ 0.96
SSR1P43307 AC020763.4-201ENST00000623414 4170 ntBASIC21.02■□□□□ 0.96
SSR1P43307 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC21.02■□□□□ 0.95
SSR1P43307 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
SSR1P43307 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
SSR1P43307 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
SSR1P43307 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.95
SSR1P43307 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
SSR1P43307 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SSR1P43307 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SSR1P43307 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC21.01■□□□□ 0.95
SSR1P43307 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
SSR1P43307 METTL26-203ENST00000397664 604 ntTSL 2 BASIC21.01■□□□□ 0.95
SSR1P43307 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC21.01■□□□□ 0.95
SSR1P43307 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC21.01■□□□□ 0.95
SSR1P43307 CYP2T3P-201ENST00000601990 817 ntBASIC21.01■□□□□ 0.95
SSR1P43307 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC21.01■□□□□ 0.95
SSR1P43307 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SSR1P43307 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC21.01■□□□□ 0.95
SSR1P43307 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SSR1P43307 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC21.01■□□□□ 0.95
SSR1P43307 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
SSR1P43307 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SSR1P43307 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC21.01■□□□□ 0.95
SSR1P43307 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC21.01■□□□□ 0.95
SSR1P43307 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SSR1P43307 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC21.01■□□□□ 0.95
SSR1P43307 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
SSR1P43307 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SSR1P43307 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SSR1P43307 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
SSR1P43307 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
SSR1P43307 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC21■□□□□ 0.95
SSR1P43307 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
SSR1P43307 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC21■□□□□ 0.95
SSR1P43307 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC21■□□□□ 0.95
SSR1P43307 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
SSR1P43307 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
SSR1P43307 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC21■□□□□ 0.95
SSR1P43307 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SSR1P43307 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC21■□□□□ 0.95
SSR1P43307 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC21■□□□□ 0.95
SSR1P43307 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
SSR1P43307 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SSR1P43307 AC080038.1-201ENST00000611274 1154 ntBASIC21■□□□□ 0.95
SSR1P43307 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC21■□□□□ 0.95
SSR1P43307 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms