Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
RFC3P40938 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC18.16■□□□□ 0.5
RFC3P40938 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RFC3P40938 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
RFC3P40938 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC18.16■□□□□ 0.5
RFC3P40938 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RFC3P40938 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC18.16■□□□□ 0.5
RFC3P40938 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
RFC3P40938 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
RFC3P40938 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RFC3P40938 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC18.16■□□□□ 0.5
RFC3P40938 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
RFC3P40938 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
RFC3P40938 KRT8P20-201ENST00000423953 1409 ntBASIC18.15■□□□□ 0.5
RFC3P40938 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.15■□□□□ 0.5
RFC3P40938 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RFC3P40938 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
RFC3P40938 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
RFC3P40938 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RFC3P40938 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RFC3P40938 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
RFC3P40938 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC18.15■□□□□ 0.5
RFC3P40938 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RFC3P40938 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC18.15■□□□□ 0.5
RFC3P40938 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC18.15■□□□□ 0.5
RFC3P40938 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC18.15■□□□□ 0.5
RFC3P40938 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC18.15■□□□□ 0.5
RFC3P40938 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC18.15■□□□□ 0.5
RFC3P40938 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC18.15■□□□□ 0.5
RFC3P40938 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
RFC3P40938 AL031963.3-201ENST00000606441 850 ntBASIC18.15■□□□□ 0.5
RFC3P40938 AL121829.2-201ENST00000620908 328 ntBASIC18.15■□□□□ 0.5
RFC3P40938 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC18.15■□□□□ 0.5
RFC3P40938 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RFC3P40938 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC18.15■□□□□ 0.5
RFC3P40938 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC18.15■□□□□ 0.5
RFC3P40938 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RFC3P40938 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RFC3P40938 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC18.15■□□□□ 0.5
RFC3P40938 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC18.15■□□□□ 0.5
RFC3P40938 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
RFC3P40938 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.14■□□□□ 0.5
RFC3P40938 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.5
RFC3P40938 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC18.14■□□□□ 0.49
RFC3P40938 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
RFC3P40938 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC18.14■□□□□ 0.49
RFC3P40938 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RFC3P40938 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
RFC3P40938 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RFC3P40938 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
RFC3P40938 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RFC3P40938 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RFC3P40938 AC012618.2-201ENST00000428058 849 ntBASIC18.14■□□□□ 0.49
RFC3P40938 AC233702.5-201ENST00000584107 538 ntBASIC18.14■□□□□ 0.49
RFC3P40938 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC18.14■□□□□ 0.49
RFC3P40938 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
RFC3P40938 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
RFC3P40938 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC18.14■□□□□ 0.49
RFC3P40938 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.14■□□□□ 0.49
RFC3P40938 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RFC3P40938 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.14■□□□□ 0.49
RFC3P40938 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RFC3P40938 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
RFC3P40938 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RFC3P40938 NBPF21P-201ENST00000425093 1451 ntBASIC18.14■□□□□ 0.49
RFC3P40938 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RFC3P40938 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
RFC3P40938 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC18.13■□□□□ 0.49
RFC3P40938 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC18.13■□□□□ 0.49
RFC3P40938 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC18.13■□□□□ 0.49
RFC3P40938 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RFC3P40938 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RFC3P40938 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RFC3P40938 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.13■□□□□ 0.49
RFC3P40938 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RFC3P40938 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
RFC3P40938 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
RFC3P40938 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
RFC3P40938 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RFC3P40938 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
RFC3P40938 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RFC3P40938 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
RFC3P40938 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
RFC3P40938 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC18.13■□□□□ 0.49
RFC3P40938 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RFC3P40938 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
RFC3P40938 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC18.13■□□□□ 0.49
RFC3P40938 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
RFC3P40938 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC18.13■□□□□ 0.49
RFC3P40938 AL121906.2-201ENST00000621597 723 ntBASIC18.13■□□□□ 0.49
RFC3P40938 AL049637.2-201ENST00000641778 930 ntBASIC18.13■□□□□ 0.49
RFC3P40938 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
RFC3P40938 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RFC3P40938 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
RFC3P40938 KRT8P17-201ENST00000453110 1448 ntBASIC18.13■□□□□ 0.49
RFC3P40938 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
RFC3P40938 SMG8-203ENST00000578922 2178 ntBASIC18.13■□□□□ 0.49
RFC3P40938 AC092720.2-201ENST00000602388 1665 ntBASIC18.12■□□□□ 0.49
RFC3P40938 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
RFC3P40938 AC007952.6-201ENST00000573168 2673 ntBASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms