Protein–RNA interactions for Protein: P37088

SCNN1A, Amiloride-sensitive sodium channel subunit alpha, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1AP37088 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SCNN1AP37088 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SCNN1AP37088 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SCNN1AP37088 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SCNN1AP37088 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC20.7■□□□□ 0.9
SCNN1AP37088 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SCNN1AP37088 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SCNN1AP37088 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SCNN1AP37088 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SCNN1AP37088 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SCNN1AP37088 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SCNN1AP37088 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC20.7■□□□□ 0.9
SCNN1AP37088 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC20.7■□□□□ 0.9
SCNN1AP37088 DENND3-207ENST00000518347 850 ntTSL 2 BASIC20.7■□□□□ 0.9
SCNN1AP37088 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC20.7■□□□□ 0.9
SCNN1AP37088 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SCNN1AP37088 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SCNN1AP37088 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.7■□□□□ 0.9
SCNN1AP37088 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC20.7■□□□□ 0.9
SCNN1AP37088 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.7■□□□□ 0.9
SCNN1AP37088 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SCNN1AP37088 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC20.7■□□□□ 0.9
SCNN1AP37088 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SCNN1AP37088 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
SCNN1AP37088 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.7■□□□□ 0.9
SCNN1AP37088 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
SCNN1AP37088 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC20.7■□□□□ 0.9
SCNN1AP37088 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SCNN1AP37088 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SCNN1AP37088 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SCNN1AP37088 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.69■□□□□ 0.9
SCNN1AP37088 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SCNN1AP37088 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SCNN1AP37088 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SCNN1AP37088 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC20.69■□□□□ 0.9
SCNN1AP37088 CD99P1-205ENST00000527459 561 ntBASIC20.69■□□□□ 0.9
SCNN1AP37088 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC20.69■□□□□ 0.9
SCNN1AP37088 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SCNN1AP37088 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
SCNN1AP37088 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SCNN1AP37088 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SCNN1AP37088 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20.69■□□□□ 0.9
SCNN1AP37088 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SCNN1AP37088 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
SCNN1AP37088 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC20.68■□□□□ 0.9
SCNN1AP37088 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
SCNN1AP37088 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC20.68■□□□□ 0.9
SCNN1AP37088 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SCNN1AP37088 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SCNN1AP37088 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC20.68■□□□□ 0.9
SCNN1AP37088 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SCNN1AP37088 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
SCNN1AP37088 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SCNN1AP37088 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC20.68■□□□□ 0.9
SCNN1AP37088 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC20.68■□□□□ 0.9
SCNN1AP37088 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SCNN1AP37088 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC20.68■□□□□ 0.9
SCNN1AP37088 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SCNN1AP37088 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC20.68■□□□□ 0.9
SCNN1AP37088 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SCNN1AP37088 MMAB-206ENST00000540016 945 ntTSL 3 BASIC20.68■□□□□ 0.9
SCNN1AP37088 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
SCNN1AP37088 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SCNN1AP37088 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SCNN1AP37088 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SCNN1AP37088 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC20.68■□□□□ 0.9
SCNN1AP37088 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC20.68■□□□□ 0.9
SCNN1AP37088 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SCNN1AP37088 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.67■□□□□ 0.9
SCNN1AP37088 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SCNN1AP37088 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SCNN1AP37088 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SCNN1AP37088 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SCNN1AP37088 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SCNN1AP37088 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.67■□□□□ 0.9
SCNN1AP37088 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
SCNN1AP37088 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
SCNN1AP37088 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC20.67■□□□□ 0.9
SCNN1AP37088 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC20.67■□□□□ 0.9
SCNN1AP37088 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC20.67■□□□□ 0.9
SCNN1AP37088 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SCNN1AP37088 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SCNN1AP37088 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
SCNN1AP37088 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC20.67■□□□□ 0.9
SCNN1AP37088 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
SCNN1AP37088 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
SCNN1AP37088 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC20.66■□□□□ 0.9
SCNN1AP37088 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
SCNN1AP37088 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
SCNN1AP37088 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.66■□□□□ 0.9
SCNN1AP37088 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SCNN1AP37088 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
SCNN1AP37088 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
SCNN1AP37088 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SCNN1AP37088 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SCNN1AP37088 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SCNN1AP37088 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC20.66■□□□□ 0.9
SCNN1AP37088 ADM-205ENST00000528544 586 ntTSL 2 BASIC20.66■□□□□ 0.9
SCNN1AP37088 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
SCNN1AP37088 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms