Protein–RNA interactions for Protein: P35443

THBS4, Thrombospondin-4, humanhuman

Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS4P35443 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
THBS4P35443 AC092368.3-202ENST00000574180 1591 ntBASIC17.45■□□□□ 0.38
THBS4P35443 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC17.45■□□□□ 0.38
THBS4P35443 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC17.44■□□□□ 0.38
THBS4P35443 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
THBS4P35443 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
THBS4P35443 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
THBS4P35443 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
THBS4P35443 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
THBS4P35443 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
THBS4P35443 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
THBS4P35443 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
THBS4P35443 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
THBS4P35443 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
THBS4P35443 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC17.44■□□□□ 0.38
THBS4P35443 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
THBS4P35443 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC17.44■□□□□ 0.38
THBS4P35443 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC17.44■□□□□ 0.38
THBS4P35443 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC17.44■□□□□ 0.38
THBS4P35443 UNC93B5-201ENST00000530315 699 ntBASIC17.44■□□□□ 0.38
THBS4P35443 TMEM191A-211ENST00000637163 1067 ntBASIC17.44■□□□□ 0.38
THBS4P35443 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
THBS4P35443 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
THBS4P35443 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
THBS4P35443 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
THBS4P35443 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC17.44■□□□□ 0.38
THBS4P35443 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
THBS4P35443 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC17.44■□□□□ 0.38
THBS4P35443 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
THBS4P35443 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
THBS4P35443 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
THBS4P35443 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
THBS4P35443 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC17.43■□□□□ 0.38
THBS4P35443 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC17.43■□□□□ 0.38
THBS4P35443 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
THBS4P35443 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
THBS4P35443 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
THBS4P35443 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
THBS4P35443 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
THBS4P35443 ESRRAP1-201ENST00000400596 1257 ntBASIC17.43■□□□□ 0.38
THBS4P35443 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC17.43■□□□□ 0.38
THBS4P35443 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC17.43■□□□□ 0.38
THBS4P35443 PNMA6B-201ENST00000538162 1200 ntBASIC17.43■□□□□ 0.38
THBS4P35443 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
THBS4P35443 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC17.43■□□□□ 0.38
THBS4P35443 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
THBS4P35443 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC17.43■□□□□ 0.38
THBS4P35443 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
THBS4P35443 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
THBS4P35443 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
THBS4P35443 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
THBS4P35443 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC17.42■□□□□ 0.38
THBS4P35443 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
THBS4P35443 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC17.42■□□□□ 0.38
THBS4P35443 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC17.42■□□□□ 0.38
THBS4P35443 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
THBS4P35443 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC17.42■□□□□ 0.38
THBS4P35443 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
THBS4P35443 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC17.42■□□□□ 0.38
THBS4P35443 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
THBS4P35443 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
THBS4P35443 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC17.42■□□□□ 0.38
THBS4P35443 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC17.42■□□□□ 0.38
THBS4P35443 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
THBS4P35443 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
THBS4P35443 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC17.42■□□□□ 0.38
THBS4P35443 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC17.42■□□□□ 0.38
THBS4P35443 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
THBS4P35443 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC17.42■□□□□ 0.38
THBS4P35443 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
THBS4P35443 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
THBS4P35443 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
THBS4P35443 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC17.41■□□□□ 0.38
THBS4P35443 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
THBS4P35443 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
THBS4P35443 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
THBS4P35443 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
THBS4P35443 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
THBS4P35443 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
THBS4P35443 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
THBS4P35443 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
THBS4P35443 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
THBS4P35443 REXO2-208ENST00000539754 791 ntTSL 2 BASIC17.41■□□□□ 0.38
THBS4P35443 MMAB-206ENST00000540016 945 ntTSL 3 BASIC17.41■□□□□ 0.38
THBS4P35443 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
THBS4P35443 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
THBS4P35443 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
THBS4P35443 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
THBS4P35443 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
THBS4P35443 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
THBS4P35443 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
THBS4P35443 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
THBS4P35443 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC17.41■□□□□ 0.38
THBS4P35443 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
THBS4P35443 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC17.4■□□□□ 0.38
THBS4P35443 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC17.4■□□□□ 0.38
THBS4P35443 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
THBS4P35443 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
THBS4P35443 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC17.4■□□□□ 0.38
THBS4P35443 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms