Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
HOXC8P31273 KRT18P22-201ENST00000402024 1347 ntBASIC21.79■■□□□ 1.08
HOXC8P31273 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
HOXC8P31273 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
HOXC8P31273 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC21.78■■□□□ 1.08
HOXC8P31273 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
HOXC8P31273 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
HOXC8P31273 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
HOXC8P31273 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
HOXC8P31273 TERF1P1-201ENST00000311003 1181 ntBASIC21.78■■□□□ 1.08
HOXC8P31273 PRR31-201ENST00000371629 978 ntTSL 2 BASIC21.78■■□□□ 1.08
HOXC8P31273 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
HOXC8P31273 TUBB8P6-201ENST00000436895 1288 ntBASIC21.78■■□□□ 1.08
HOXC8P31273 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC21.78■■□□□ 1.08
HOXC8P31273 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
HOXC8P31273 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC21.78■■□□□ 1.08
HOXC8P31273 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
HOXC8P31273 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
HOXC8P31273 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
HOXC8P31273 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC21.78■■□□□ 1.08
HOXC8P31273 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
HOXC8P31273 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
HOXC8P31273 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC21.78■■□□□ 1.08
HOXC8P31273 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
HOXC8P31273 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
HOXC8P31273 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
HOXC8P31273 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC21.77■■□□□ 1.08
HOXC8P31273 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
HOXC8P31273 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC21.77■■□□□ 1.08
HOXC8P31273 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
HOXC8P31273 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC21.77■■□□□ 1.08
HOXC8P31273 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC21.77■■□□□ 1.08
HOXC8P31273 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC21.77■■□□□ 1.08
HOXC8P31273 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
HOXC8P31273 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC21.77■■□□□ 1.08
HOXC8P31273 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
HOXC8P31273 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
HOXC8P31273 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
HOXC8P31273 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
HOXC8P31273 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
HOXC8P31273 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
HOXC8P31273 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
HOXC8P31273 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC21.76■■□□□ 1.07
HOXC8P31273 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
HOXC8P31273 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC21.76■■□□□ 1.07
HOXC8P31273 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
HOXC8P31273 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC21.76■■□□□ 1.07
HOXC8P31273 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC21.76■■□□□ 1.07
HOXC8P31273 SLC25A3P1-201ENST00000443844 931 ntBASIC21.76■■□□□ 1.07
HOXC8P31273 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
HOXC8P31273 KRT18P35-201ENST00000510488 1269 ntBASIC21.76■■□□□ 1.07
HOXC8P31273 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC21.76■■□□□ 1.07
HOXC8P31273 RBM42-202ENST00000586618 771 ntTSL 3 BASIC21.76■■□□□ 1.07
HOXC8P31273 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
HOXC8P31273 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC21.76■■□□□ 1.07
HOXC8P31273 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
HOXC8P31273 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
HOXC8P31273 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
HOXC8P31273 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC21.75■■□□□ 1.07
HOXC8P31273 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
HOXC8P31273 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
HOXC8P31273 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
HOXC8P31273 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC21.75■■□□□ 1.07
HOXC8P31273 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
HOXC8P31273 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
HOXC8P31273 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
HOXC8P31273 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
HOXC8P31273 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
HOXC8P31273 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC21.75■■□□□ 1.07
HOXC8P31273 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
HOXC8P31273 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
HOXC8P31273 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
HOXC8P31273 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
HOXC8P31273 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
HOXC8P31273 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC21.74■■□□□ 1.07
HOXC8P31273 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
HOXC8P31273 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
HOXC8P31273 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC21.74■■□□□ 1.07
HOXC8P31273 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC21.74■■□□□ 1.07
HOXC8P31273 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC21.74■■□□□ 1.07
HOXC8P31273 TMA16-209ENST00000513272 803 ntTSL 2 BASIC21.74■■□□□ 1.07
HOXC8P31273 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
HOXC8P31273 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
HOXC8P31273 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
HOXC8P31273 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC21.74■■□□□ 1.07
HOXC8P31273 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
HOXC8P31273 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
HOXC8P31273 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
HOXC8P31273 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
HOXC8P31273 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
HOXC8P31273 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
HOXC8P31273 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC21.73■■□□□ 1.07
HOXC8P31273 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC21.73■■□□□ 1.07
HOXC8P31273 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
HOXC8P31273 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
HOXC8P31273 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
HOXC8P31273 TSPY14P-201ENST00000303979 915 ntBASIC21.73■■□□□ 1.07
HOXC8P31273 GRAMD4P8-201ENST00000605465 1115 ntBASIC21.73■■□□□ 1.07
HOXC8P31273 HLA-A-209ENST00000638375 975 ntBASIC21.73■■□□□ 1.07
HOXC8P31273 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC21.73■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 442.8 ms