Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RAB3BP20337 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RAB3BP20337 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RAB3BP20337 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RAB3BP20337 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
RAB3BP20337 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC17.37■□□□□ 0.37
RAB3BP20337 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RAB3BP20337 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
RAB3BP20337 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
RAB3BP20337 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RAB3BP20337 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RAB3BP20337 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RAB3BP20337 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RAB3BP20337 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
RAB3BP20337 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RAB3BP20337 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC17.36■□□□□ 0.37
RAB3BP20337 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC17.36■□□□□ 0.37
RAB3BP20337 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RAB3BP20337 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RAB3BP20337 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RAB3BP20337 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC17.36■□□□□ 0.37
RAB3BP20337 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RAB3BP20337 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RAB3BP20337 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
RAB3BP20337 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
RAB3BP20337 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC17.36■□□□□ 0.37
RAB3BP20337 AL138781.2-201ENST00000617896 1843 ntBASIC17.35■□□□□ 0.37
RAB3BP20337 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RAB3BP20337 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RAB3BP20337 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC17.35■□□□□ 0.37
RAB3BP20337 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RAB3BP20337 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RAB3BP20337 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC17.35■□□□□ 0.37
RAB3BP20337 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
RAB3BP20337 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
RAB3BP20337 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RAB3BP20337 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RAB3BP20337 AC010141.2-201ENST00000452426 721 ntBASIC17.35■□□□□ 0.37
RAB3BP20337 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC17.35■□□□□ 0.37
RAB3BP20337 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC17.35■□□□□ 0.37
RAB3BP20337 AL358852.1-201ENST00000623174 1268 ntBASIC17.35■□□□□ 0.37
RAB3BP20337 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC17.35■□□□□ 0.37
RAB3BP20337 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RAB3BP20337 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC17.35■□□□□ 0.37
RAB3BP20337 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RAB3BP20337 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC17.35■□□□□ 0.37
RAB3BP20337 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RAB3BP20337 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
RAB3BP20337 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC17.35■□□□□ 0.37
RAB3BP20337 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
RAB3BP20337 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RAB3BP20337 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RAB3BP20337 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC17.34■□□□□ 0.37
RAB3BP20337 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RAB3BP20337 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RAB3BP20337 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
RAB3BP20337 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
RAB3BP20337 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RAB3BP20337 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
RAB3BP20337 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RAB3BP20337 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RAB3BP20337 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
RAB3BP20337 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
RAB3BP20337 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC17.34■□□□□ 0.37
RAB3BP20337 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RAB3BP20337 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC17.34■□□□□ 0.37
RAB3BP20337 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RAB3BP20337 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
RAB3BP20337 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RAB3BP20337 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC17.34■□□□□ 0.37
RAB3BP20337 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC17.34■□□□□ 0.37
RAB3BP20337 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC17.34■□□□□ 0.37
RAB3BP20337 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.34■□□□□ 0.37
RAB3BP20337 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RAB3BP20337 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RAB3BP20337 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
RAB3BP20337 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.37
RAB3BP20337 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
RAB3BP20337 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RAB3BP20337 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RAB3BP20337 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
RAB3BP20337 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RAB3BP20337 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC17.33■□□□□ 0.36
RAB3BP20337 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RAB3BP20337 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RAB3BP20337 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RAB3BP20337 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RAB3BP20337 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RAB3BP20337 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
RAB3BP20337 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC17.33■□□□□ 0.36
RAB3BP20337 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RAB3BP20337 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.36
RAB3BP20337 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC17.33■□□□□ 0.36
RAB3BP20337 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC17.33■□□□□ 0.36
RAB3BP20337 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC17.33■□□□□ 0.36
RAB3BP20337 AL355001.2-201ENST00000620617 1191 ntBASIC17.33■□□□□ 0.36
RAB3BP20337 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
RAB3BP20337 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RAB3BP20337 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.36
RAB3BP20337 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms