Protein–RNA interactions for Protein: P0DN86

CGB3, Choriogonadotropin subunit beta 3, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGB3P0DN86 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC16.31■□□□□ 0.2
CGB3P0DN86 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC16.31■□□□□ 0.2
CGB3P0DN86 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CGB3P0DN86 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CGB3P0DN86 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CGB3P0DN86 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CGB3P0DN86 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CGB3P0DN86 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC16.31■□□□□ 0.2
CGB3P0DN86 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CGB3P0DN86 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CGB3P0DN86 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC16.31■□□□□ 0.2
CGB3P0DN86 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CGB3P0DN86 SLC29A4P2-201ENST00000504749 1089 ntBASIC16.31■□□□□ 0.2
CGB3P0DN86 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC16.31■□□□□ 0.2
CGB3P0DN86 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC16.31■□□□□ 0.2
CGB3P0DN86 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CGB3P0DN86 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC16.31■□□□□ 0.2
CGB3P0DN86 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CGB3P0DN86 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CGB3P0DN86 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC16.31■□□□□ 0.2
CGB3P0DN86 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
CGB3P0DN86 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CGB3P0DN86 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CGB3P0DN86 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CGB3P0DN86 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC16.31■□□□□ 0.2
CGB3P0DN86 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CGB3P0DN86 AL158211.5-201ENST00000623583 2518 ntBASIC16.3■□□□□ 0.2
CGB3P0DN86 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CGB3P0DN86 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CGB3P0DN86 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CGB3P0DN86 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC16.3■□□□□ 0.2
CGB3P0DN86 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CGB3P0DN86 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CGB3P0DN86 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CGB3P0DN86 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CGB3P0DN86 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CGB3P0DN86 AC018553.1-201ENST00000616682 1458 ntBASIC16.3■□□□□ 0.2
CGB3P0DN86 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CGB3P0DN86 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CGB3P0DN86 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC16.3■□□□□ 0.2
CGB3P0DN86 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC16.3■□□□□ 0.2
CGB3P0DN86 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CGB3P0DN86 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CGB3P0DN86 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CGB3P0DN86 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CGB3P0DN86 HLA-L-209ENST00000420110 1011 ntBASIC16.3■□□□□ 0.2
CGB3P0DN86 PNMA6B-201ENST00000538162 1200 ntBASIC16.3■□□□□ 0.2
CGB3P0DN86 REXO2-208ENST00000539754 791 ntTSL 2 BASIC16.3■□□□□ 0.2
CGB3P0DN86 RGMA-211ENST00000557420 989 ntTSL 3 BASIC16.3■□□□□ 0.2
CGB3P0DN86 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC16.3■□□□□ 0.2
CGB3P0DN86 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC16.3■□□□□ 0.2
CGB3P0DN86 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC16.3■□□□□ 0.2
CGB3P0DN86 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CGB3P0DN86 AC006557.6-201ENST00000623071 864 ntBASIC16.3■□□□□ 0.2
CGB3P0DN86 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CGB3P0DN86 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC16.3■□□□□ 0.2
CGB3P0DN86 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC16.3■□□□□ 0.2
CGB3P0DN86 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CGB3P0DN86 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CGB3P0DN86 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
CGB3P0DN86 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CGB3P0DN86 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CGB3P0DN86 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CGB3P0DN86 TFP1-202ENST00000475455 1573 ntBASIC16.3■□□□□ 0.2
CGB3P0DN86 AC092368.3-202ENST00000574180 1591 ntBASIC16.3■□□□□ 0.2
CGB3P0DN86 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CGB3P0DN86 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CGB3P0DN86 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
CGB3P0DN86 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
CGB3P0DN86 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CGB3P0DN86 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CGB3P0DN86 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CGB3P0DN86 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CGB3P0DN86 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CGB3P0DN86 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CGB3P0DN86 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CGB3P0DN86 ID1-201ENST00000376105 1233 ntBASIC16.29■□□□□ 0.2
CGB3P0DN86 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC16.29■□□□□ 0.2
CGB3P0DN86 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC16.29■□□□□ 0.2
CGB3P0DN86 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC16.29■□□□□ 0.2
CGB3P0DN86 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC16.29■□□□□ 0.2
CGB3P0DN86 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC16.29■□□□□ 0.2
CGB3P0DN86 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC16.29■□□□□ 0.2
CGB3P0DN86 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CGB3P0DN86 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC16.29■□□□□ 0.2
CGB3P0DN86 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CGB3P0DN86 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC16.29■□□□□ 0.2
CGB3P0DN86 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CGB3P0DN86 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC16.29■□□□□ 0.2
CGB3P0DN86 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC16.29■□□□□ 0.2
CGB3P0DN86 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CGB3P0DN86 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CGB3P0DN86 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC16.28■□□□□ 0.2
CGB3P0DN86 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CGB3P0DN86 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CGB3P0DN86 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC16.28■□□□□ 0.2
CGB3P0DN86 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CGB3P0DN86 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC16.28■□□□□ 0.2
CGB3P0DN86 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CGB3P0DN86 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms