Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RAB40ALP0C0E4 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC18.74■□□□□ 0.59
RAB40ALP0C0E4 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RAB40ALP0C0E4 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RAB40ALP0C0E4 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
RAB40ALP0C0E4 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18.73■□□□□ 0.59
RAB40ALP0C0E4 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
RAB40ALP0C0E4 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC18.73■□□□□ 0.59
RAB40ALP0C0E4 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC18.73■□□□□ 0.59
RAB40ALP0C0E4 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RAB40ALP0C0E4 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RAB40ALP0C0E4 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RAB40ALP0C0E4 LINC01521-201ENST00000504184 1943 ntBASIC18.73■□□□□ 0.59
RAB40ALP0C0E4 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
RAB40ALP0C0E4 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RAB40ALP0C0E4 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RAB40ALP0C0E4 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
RAB40ALP0C0E4 ECEL1P3-201ENST00000427961 737 ntBASIC18.73■□□□□ 0.59
RAB40ALP0C0E4 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RAB40ALP0C0E4 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
RAB40ALP0C0E4 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC18.73■□□□□ 0.59
RAB40ALP0C0E4 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC18.73■□□□□ 0.59
RAB40ALP0C0E4 RPS15-203ENST00000586096 570 ntTSL 2 BASIC18.73■□□□□ 0.59
RAB40ALP0C0E4 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
RAB40ALP0C0E4 PLK5-205ENST00000642079 1969 ntBASIC18.73■□□□□ 0.59
RAB40ALP0C0E4 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RAB40ALP0C0E4 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
RAB40ALP0C0E4 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
RAB40ALP0C0E4 KRT8P17-201ENST00000453110 1448 ntBASIC18.73■□□□□ 0.59
RAB40ALP0C0E4 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
RAB40ALP0C0E4 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RAB40ALP0C0E4 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RAB40ALP0C0E4 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
RAB40ALP0C0E4 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC18.72■□□□□ 0.59
RAB40ALP0C0E4 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RAB40ALP0C0E4 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC18.72■□□□□ 0.59
RAB40ALP0C0E4 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC18.72■□□□□ 0.59
RAB40ALP0C0E4 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RAB40ALP0C0E4 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RAB40ALP0C0E4 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC18.72■□□□□ 0.59
RAB40ALP0C0E4 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC18.72■□□□□ 0.59
RAB40ALP0C0E4 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC18.72■□□□□ 0.59
RAB40ALP0C0E4 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RAB40ALP0C0E4 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RAB40ALP0C0E4 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RAB40ALP0C0E4 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RAB40ALP0C0E4 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
RAB40ALP0C0E4 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RAB40ALP0C0E4 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
RAB40ALP0C0E4 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC18.71■□□□□ 0.59
RAB40ALP0C0E4 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RAB40ALP0C0E4 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC18.71■□□□□ 0.59
RAB40ALP0C0E4 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
RAB40ALP0C0E4 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
RAB40ALP0C0E4 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RAB40ALP0C0E4 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC18.71■□□□□ 0.59
RAB40ALP0C0E4 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC18.71■□□□□ 0.59
RAB40ALP0C0E4 AC073195.1-201ENST00000607241 877 ntBASIC18.71■□□□□ 0.59
RAB40ALP0C0E4 AC026471.5-201ENST00000615068 467 ntBASIC18.71■□□□□ 0.59
RAB40ALP0C0E4 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC18.71■□□□□ 0.59
RAB40ALP0C0E4 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RAB40ALP0C0E4 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RAB40ALP0C0E4 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
RAB40ALP0C0E4 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RAB40ALP0C0E4 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC18.71■□□□□ 0.59
RAB40ALP0C0E4 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
RAB40ALP0C0E4 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RAB40ALP0C0E4 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
RAB40ALP0C0E4 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
RAB40ALP0C0E4 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RAB40ALP0C0E4 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RAB40ALP0C0E4 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RAB40ALP0C0E4 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC18.7■□□□□ 0.58
RAB40ALP0C0E4 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
RAB40ALP0C0E4 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RAB40ALP0C0E4 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC18.7■□□□□ 0.58
RAB40ALP0C0E4 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC18.7■□□□□ 0.58
RAB40ALP0C0E4 GRAP-204ENST00000573099 846 ntTSL 3 BASIC18.7■□□□□ 0.58
RAB40ALP0C0E4 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC18.7■□□□□ 0.58
RAB40ALP0C0E4 CD177P1-201ENST00000606252 935 ntBASIC18.7■□□□□ 0.58
RAB40ALP0C0E4 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RAB40ALP0C0E4 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC18.7■□□□□ 0.58
RAB40ALP0C0E4 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RAB40ALP0C0E4 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RAB40ALP0C0E4 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RAB40ALP0C0E4 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
RAB40ALP0C0E4 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
RAB40ALP0C0E4 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
RAB40ALP0C0E4 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RAB40ALP0C0E4 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RAB40ALP0C0E4 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.69■□□□□ 0.58
RAB40ALP0C0E4 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RAB40ALP0C0E4 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RAB40ALP0C0E4 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC18.69■□□□□ 0.58
RAB40ALP0C0E4 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RAB40ALP0C0E4 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RAB40ALP0C0E4 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RAB40ALP0C0E4 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC18.69■□□□□ 0.58
RAB40ALP0C0E4 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RAB40ALP0C0E4 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms