Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RETP07949 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC20.04■□□□□ 0.8
RETP07949 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
RETP07949 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC20.04■□□□□ 0.8
RETP07949 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC20.04■□□□□ 0.8
RETP07949 HES2-206ENST00000489730 730 ntTSL 2 BASIC20.04■□□□□ 0.8
RETP07949 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC20.04■□□□□ 0.8
RETP07949 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC20.04■□□□□ 0.8
RETP07949 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
RETP07949 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RETP07949 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RETP07949 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.04■□□□□ 0.8
RETP07949 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
RETP07949 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
RETP07949 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RETP07949 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC20.03■□□□□ 0.8
RETP07949 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RETP07949 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
RETP07949 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
RETP07949 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RETP07949 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RETP07949 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC20.03■□□□□ 0.8
RETP07949 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC20.03■□□□□ 0.8
RETP07949 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC20.03■□□□□ 0.8
RETP07949 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RETP07949 USF2-205ENST00000594064 1179 ntTSL 2 BASIC20.03■□□□□ 0.8
RETP07949 AC004264.1-201ENST00000608354 794 ntBASIC20.03■□□□□ 0.8
RETP07949 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC20.03■□□□□ 0.8
RETP07949 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RETP07949 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RETP07949 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.03■□□□□ 0.8
RETP07949 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RETP07949 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.03■□□□□ 0.8
RETP07949 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC20.02■□□□□ 0.8
RETP07949 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC20.02■□□□□ 0.8
RETP07949 AL390955.1-201ENST00000428694 934 ntBASIC20.02■□□□□ 0.8
RETP07949 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC20.02■□□□□ 0.8
RETP07949 F2R-202ENST00000505600 442 ntTSL 2 BASIC20.02■□□□□ 0.8
RETP07949 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC20.02■□□□□ 0.8
RETP07949 LTBR-211ENST00000543190 785 ntTSL 3 BASIC20.02■□□□□ 0.8
RETP07949 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC20.02■□□□□ 0.8
RETP07949 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC20.02■□□□□ 0.8
RETP07949 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RETP07949 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
RETP07949 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
RETP07949 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.02■□□□□ 0.79
RETP07949 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
RETP07949 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.02■□□□□ 0.79
RETP07949 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC20.02■□□□□ 0.79
RETP07949 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
RETP07949 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.79
RETP07949 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
RETP07949 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.01■□□□□ 0.79
RETP07949 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
RETP07949 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RETP07949 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RETP07949 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
RETP07949 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC20.01■□□□□ 0.79
RETP07949 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC20.01■□□□□ 0.79
RETP07949 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC20.01■□□□□ 0.79
RETP07949 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC20.01■□□□□ 0.79
RETP07949 WWOX-216ENST00000569818 525 ntBASIC20.01■□□□□ 0.79
RETP07949 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC20.01■□□□□ 0.79
RETP07949 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC20.01■□□□□ 0.79
RETP07949 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.01■□□□□ 0.79
RETP07949 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RETP07949 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC20.01■□□□□ 0.79
RETP07949 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RETP07949 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
RETP07949 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RETP07949 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
RETP07949 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
RETP07949 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
RETP07949 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
RETP07949 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RETP07949 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
RETP07949 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
RETP07949 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RETP07949 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC20■□□□□ 0.79
RETP07949 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC20■□□□□ 0.79
RETP07949 AC116562.2-201ENST00000507042 360 ntBASIC20■□□□□ 0.79
RETP07949 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC20■□□□□ 0.79
RETP07949 CLN6-221ENST00000637494 765 ntTSL 5 BASIC20■□□□□ 0.79
RETP07949 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RETP07949 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20■□□□□ 0.79
RETP07949 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20■□□□□ 0.79
RETP07949 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RETP07949 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RETP07949 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC20■□□□□ 0.79
RETP07949 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
RETP07949 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RETP07949 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC20■□□□□ 0.79
RETP07949 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
RETP07949 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.99■□□□□ 0.79
RETP07949 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RETP07949 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RETP07949 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RETP07949 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
RETP07949 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RETP07949 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms