Protein–RNA interactions for Protein: P07858

CTSB, Cathepsin B, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSBP07858 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
CTSBP07858 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CTSBP07858 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CTSBP07858 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC18.86■□□□□ 0.61
CTSBP07858 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CTSBP07858 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CTSBP07858 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
CTSBP07858 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CTSBP07858 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC18.85■□□□□ 0.61
CTSBP07858 AC116351.2-201ENST00000606540 1585 ntBASIC18.85■□□□□ 0.61
CTSBP07858 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CTSBP07858 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
CTSBP07858 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
CTSBP07858 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.85■□□□□ 0.61
CTSBP07858 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CTSBP07858 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CTSBP07858 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CTSBP07858 MDFI-202ENST00000373050 809 ntTSL 2 BASIC18.85■□□□□ 0.61
CTSBP07858 RPS2P55-201ENST00000397318 883 ntBASIC18.85■□□□□ 0.61
CTSBP07858 SNORA78-201ENST00000459373 127 ntBASIC18.85■□□□□ 0.61
CTSBP07858 AC107956.1-201ENST00000494359 873 ntBASIC18.85■□□□□ 0.61
CTSBP07858 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC18.85■□□□□ 0.61
CTSBP07858 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
CTSBP07858 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC18.85■□□□□ 0.61
CTSBP07858 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC18.85■□□□□ 0.61
CTSBP07858 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC18.85■□□□□ 0.61
CTSBP07858 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC18.85■□□□□ 0.61
CTSBP07858 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
CTSBP07858 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
CTSBP07858 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
CTSBP07858 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CTSBP07858 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CTSBP07858 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CTSBP07858 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.85■□□□□ 0.61
CTSBP07858 TFP1-202ENST00000475455 1573 ntBASIC18.85■□□□□ 0.61
CTSBP07858 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
CTSBP07858 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC18.84■□□□□ 0.61
CTSBP07858 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CTSBP07858 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CTSBP07858 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CTSBP07858 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CTSBP07858 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC18.84■□□□□ 0.61
CTSBP07858 AC099778.1-201ENST00000568593 1911 ntBASIC18.84■□□□□ 0.61
CTSBP07858 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CTSBP07858 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC18.84■□□□□ 0.61
CTSBP07858 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
CTSBP07858 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC18.84■□□□□ 0.61
CTSBP07858 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CTSBP07858 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CTSBP07858 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CTSBP07858 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC18.84■□□□□ 0.61
CTSBP07858 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC18.84■□□□□ 0.61
CTSBP07858 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CTSBP07858 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC18.84■□□□□ 0.61
CTSBP07858 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC18.84■□□□□ 0.61
CTSBP07858 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC18.84■□□□□ 0.61
CTSBP07858 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CTSBP07858 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC18.84■□□□□ 0.61
CTSBP07858 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC18.84■□□□□ 0.61
CTSBP07858 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC18.84■□□□□ 0.61
CTSBP07858 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CTSBP07858 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CTSBP07858 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CTSBP07858 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CTSBP07858 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CTSBP07858 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.84■□□□□ 0.61
CTSBP07858 MOK-225ENST00000522867 1883 ntTSL 5 BASIC18.84■□□□□ 0.61
CTSBP07858 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CTSBP07858 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.84■□□□□ 0.61
CTSBP07858 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CTSBP07858 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
CTSBP07858 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
CTSBP07858 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
CTSBP07858 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CTSBP07858 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CTSBP07858 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CTSBP07858 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
CTSBP07858 PHGDH-210ENST00000641115 1638 ntBASIC18.83■□□□□ 0.61
CTSBP07858 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CTSBP07858 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CTSBP07858 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CTSBP07858 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
CTSBP07858 TREX2-204ENST00000370212 861 ntTSL 5 BASIC18.83■□□□□ 0.6
CTSBP07858 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
CTSBP07858 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
CTSBP07858 TSPY7P-201ENST00000431358 1114 ntBASIC18.83■□□□□ 0.6
CTSBP07858 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC18.83■□□□□ 0.6
CTSBP07858 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC18.83■□□□□ 0.6
CTSBP07858 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
CTSBP07858 MAX-217ENST00000557277 728 ntTSL 3 BASIC18.83■□□□□ 0.6
CTSBP07858 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CTSBP07858 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC18.83■□□□□ 0.6
CTSBP07858 CABP2-204ENST00000636477 941 ntTSL 5 BASIC18.83■□□□□ 0.6
CTSBP07858 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.83■□□□□ 0.6
CTSBP07858 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CTSBP07858 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CTSBP07858 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC18.82■□□□□ 0.6
CTSBP07858 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC18.82■□□□□ 0.6
CTSBP07858 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CTSBP07858 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms