Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PDGFAP04085 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC18.55■□□□□ 0.56
PDGFAP04085 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PDGFAP04085 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PDGFAP04085 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC18.55■□□□□ 0.56
PDGFAP04085 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC18.55■□□□□ 0.56
PDGFAP04085 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC18.55■□□□□ 0.56
PDGFAP04085 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC18.55■□□□□ 0.56
PDGFAP04085 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC18.55■□□□□ 0.56
PDGFAP04085 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
PDGFAP04085 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
PDGFAP04085 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC18.55■□□□□ 0.56
PDGFAP04085 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC18.55■□□□□ 0.56
PDGFAP04085 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PDGFAP04085 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
PDGFAP04085 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
PDGFAP04085 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PDGFAP04085 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PDGFAP04085 MMP23A-201ENST00000234610 1017 ntBASIC18.54■□□□□ 0.56
PDGFAP04085 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PDGFAP04085 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
PDGFAP04085 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PDGFAP04085 KRT18P35-201ENST00000510488 1269 ntBASIC18.54■□□□□ 0.56
PDGFAP04085 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC18.54■□□□□ 0.56
PDGFAP04085 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
PDGFAP04085 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC18.54■□□□□ 0.56
PDGFAP04085 RPS15-203ENST00000586096 570 ntTSL 2 BASIC18.54■□□□□ 0.56
PDGFAP04085 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PDGFAP04085 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC18.54■□□□□ 0.56
PDGFAP04085 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
PDGFAP04085 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.54■□□□□ 0.56
PDGFAP04085 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PDGFAP04085 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC18.54■□□□□ 0.56
PDGFAP04085 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
PDGFAP04085 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.53■□□□□ 0.56
PDGFAP04085 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.53■□□□□ 0.56
PDGFAP04085 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PDGFAP04085 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PDGFAP04085 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
PDGFAP04085 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
PDGFAP04085 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PDGFAP04085 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
PDGFAP04085 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PDGFAP04085 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PDGFAP04085 FAM197Y1-201ENST00000421178 764 ntBASIC18.53■□□□□ 0.56
PDGFAP04085 AL355355.2-201ENST00000442321 338 ntBASIC18.53■□□□□ 0.56
PDGFAP04085 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC18.53■□□□□ 0.56
PDGFAP04085 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC18.53■□□□□ 0.56
PDGFAP04085 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PDGFAP04085 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PDGFAP04085 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PDGFAP04085 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PDGFAP04085 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC18.52■□□□□ 0.56
PDGFAP04085 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PDGFAP04085 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC18.52■□□□□ 0.56
PDGFAP04085 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
PDGFAP04085 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PDGFAP04085 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.52■□□□□ 0.56
PDGFAP04085 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
PDGFAP04085 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PDGFAP04085 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PDGFAP04085 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC18.52■□□□□ 0.56
PDGFAP04085 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC18.52■□□□□ 0.56
PDGFAP04085 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PDGFAP04085 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC18.52■□□□□ 0.56
PDGFAP04085 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PDGFAP04085 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
PDGFAP04085 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC18.52■□□□□ 0.55
PDGFAP04085 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
PDGFAP04085 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
PDGFAP04085 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
PDGFAP04085 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC18.52■□□□□ 0.55
PDGFAP04085 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
PDGFAP04085 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
PDGFAP04085 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PDGFAP04085 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
PDGFAP04085 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
PDGFAP04085 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PDGFAP04085 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
PDGFAP04085 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC18.51■□□□□ 0.55
PDGFAP04085 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
PDGFAP04085 LINC01521-201ENST00000504184 1943 ntBASIC18.51■□□□□ 0.55
PDGFAP04085 KRT8P9-201ENST00000558927 1449 ntBASIC18.51■□□□□ 0.55
PDGFAP04085 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PDGFAP04085 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
PDGFAP04085 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PDGFAP04085 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PDGFAP04085 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC18.51■□□□□ 0.55
PDGFAP04085 F2R-202ENST00000505600 442 ntTSL 2 BASIC18.51■□□□□ 0.55
PDGFAP04085 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC18.51■□□□□ 0.55
PDGFAP04085 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC18.51■□□□□ 0.55
PDGFAP04085 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC18.51■□□□□ 0.55
PDGFAP04085 AL121829.2-201ENST00000620908 328 ntBASIC18.51■□□□□ 0.55
PDGFAP04085 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PDGFAP04085 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC18.51■□□□□ 0.55
PDGFAP04085 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC18.51■□□□□ 0.55
PDGFAP04085 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.51■□□□□ 0.55
PDGFAP04085 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC18.51■□□□□ 0.55
PDGFAP04085 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC18.51■□□□□ 0.55
PDGFAP04085 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms