Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
MT-ND1P03886 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
MT-ND1P03886 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.69■□□□□ 0.58
MT-ND1P03886 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
MT-ND1P03886 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
MT-ND1P03886 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
MT-ND1P03886 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MT-ND1P03886 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
MT-ND1P03886 AC007613.1-201ENST00000572811 2597 ntBASIC18.68■□□□□ 0.58
MT-ND1P03886 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
MT-ND1P03886 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
MT-ND1P03886 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
MT-ND1P03886 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC18.68■□□□□ 0.58
MT-ND1P03886 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC18.68■□□□□ 0.58
MT-ND1P03886 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC18.68■□□□□ 0.58
MT-ND1P03886 AP001160.3-201ENST00000601484 763 ntBASIC18.68■□□□□ 0.58
MT-ND1P03886 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MT-ND1P03886 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MT-ND1P03886 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MT-ND1P03886 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
MT-ND1P03886 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MT-ND1P03886 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
MT-ND1P03886 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
MT-ND1P03886 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MT-ND1P03886 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
MT-ND1P03886 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
MT-ND1P03886 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MT-ND1P03886 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
MT-ND1P03886 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
MT-ND1P03886 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
MT-ND1P03886 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC18.67■□□□□ 0.58
MT-ND1P03886 AC026471.1-201ENST00000564629 3026 ntBASIC18.67■□□□□ 0.58
MT-ND1P03886 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
MT-ND1P03886 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MT-ND1P03886 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MT-ND1P03886 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC18.67■□□□□ 0.58
MT-ND1P03886 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC18.67■□□□□ 0.58
MT-ND1P03886 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC18.67■□□□□ 0.58
MT-ND1P03886 TESC-206ENST00000541210 936 ntTSL 3 BASIC18.67■□□□□ 0.58
MT-ND1P03886 KRT18P20-201ENST00000548986 1279 ntBASIC18.67■□□□□ 0.58
MT-ND1P03886 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC18.67■□□□□ 0.58
MT-ND1P03886 CCDC92B-201ENST00000575506 885 ntBASIC18.67■□□□□ 0.58
MT-ND1P03886 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
MT-ND1P03886 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.67■□□□□ 0.58
MT-ND1P03886 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MT-ND1P03886 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MT-ND1P03886 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC18.67■□□□□ 0.58
MT-ND1P03886 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
MT-ND1P03886 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MT-ND1P03886 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
MT-ND1P03886 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MT-ND1P03886 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.66■□□□□ 0.58
MT-ND1P03886 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC18.66■□□□□ 0.58
MT-ND1P03886 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
MT-ND1P03886 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MT-ND1P03886 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MT-ND1P03886 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MT-ND1P03886 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MT-ND1P03886 COX20-201ENST00000366528 568 ntTSL 2 BASIC18.66■□□□□ 0.58
MT-ND1P03886 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC18.66■□□□□ 0.58
MT-ND1P03886 KRT18P14-201ENST00000534205 1250 ntBASIC18.66■□□□□ 0.58
MT-ND1P03886 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
MT-ND1P03886 RAB43-208ENST00000615093 783 ntTSL 5 BASIC18.66■□□□□ 0.58
MT-ND1P03886 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC18.66■□□□□ 0.58
MT-ND1P03886 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MT-ND1P03886 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MT-ND1P03886 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC18.66■□□□□ 0.58
MT-ND1P03886 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MT-ND1P03886 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC18.66■□□□□ 0.58
MT-ND1P03886 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.66■□□□□ 0.58
MT-ND1P03886 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC18.66■□□□□ 0.58
MT-ND1P03886 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MT-ND1P03886 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
MT-ND1P03886 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
MT-ND1P03886 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
MT-ND1P03886 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
MT-ND1P03886 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
MT-ND1P03886 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
MT-ND1P03886 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.65■□□□□ 0.58
MT-ND1P03886 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC18.65■□□□□ 0.58
MT-ND1P03886 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC18.65■□□□□ 0.58
MT-ND1P03886 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.65■□□□□ 0.58
MT-ND1P03886 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC18.65■□□□□ 0.58
MT-ND1P03886 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
MT-ND1P03886 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.65■□□□□ 0.58
MT-ND1P03886 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC18.65■□□□□ 0.58
MT-ND1P03886 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
MT-ND1P03886 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.65■□□□□ 0.58
MT-ND1P03886 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
MT-ND1P03886 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.65■□□□□ 0.58
MT-ND1P03886 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC18.65■□□□□ 0.58
MT-ND1P03886 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC18.65■□□□□ 0.58
MT-ND1P03886 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
MT-ND1P03886 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
MT-ND1P03886 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
MT-ND1P03886 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC18.64■□□□□ 0.58
MT-ND1P03886 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
MT-ND1P03886 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
MT-ND1P03886 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
MT-ND1P03886 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms