Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC16.6■□□□□ 0.25
SIX6O95475 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
SIX6O95475 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SIX6O95475 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SIX6O95475 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SIX6O95475 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC16.6■□□□□ 0.25
SIX6O95475 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SIX6O95475 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SIX6O95475 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SIX6O95475 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC16.6■□□□□ 0.25
SIX6O95475 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SIX6O95475 AP004607.4-201ENST00000530158 1459 ntBASIC16.6■□□□□ 0.25
SIX6O95475 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SIX6O95475 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
SIX6O95475 AC012313.1-201ENST00000593393 3059 ntBASIC16.59■□□□□ 0.25
SIX6O95475 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SIX6O95475 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.59■□□□□ 0.25
SIX6O95475 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SIX6O95475 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SIX6O95475 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
SIX6O95475 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
SIX6O95475 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC16.59■□□□□ 0.25
SIX6O95475 RNF146-205ENST00000477776 762 ntTSL 3 BASIC16.59■□□□□ 0.25
SIX6O95475 PRTG-204ENST00000561292 833 ntTSL 3 BASIC16.59■□□□□ 0.25
SIX6O95475 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC16.59■□□□□ 0.25
SIX6O95475 MIR4787-201ENST00000607364 84 ntBASIC16.59■□□□□ 0.25
SIX6O95475 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC16.59■□□□□ 0.25
SIX6O95475 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SIX6O95475 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SIX6O95475 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
SIX6O95475 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SIX6O95475 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SIX6O95475 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
SIX6O95475 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SIX6O95475 AC061975.6-201ENST00000579045 1553 ntBASIC16.59■□□□□ 0.25
SIX6O95475 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SIX6O95475 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SIX6O95475 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC16.58■□□□□ 0.25
SIX6O95475 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SIX6O95475 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.25
SIX6O95475 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SIX6O95475 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
SIX6O95475 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SIX6O95475 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SIX6O95475 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC16.58■□□□□ 0.24
SIX6O95475 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC16.58■□□□□ 0.24
SIX6O95475 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC16.58■□□□□ 0.24
SIX6O95475 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC16.58■□□□□ 0.24
SIX6O95475 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
SIX6O95475 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
SIX6O95475 AC135050.7-201ENST00000624508 2218 ntBASIC16.58■□□□□ 0.24
SIX6O95475 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SIX6O95475 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SIX6O95475 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC16.58■□□□□ 0.24
SIX6O95475 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SIX6O95475 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SIX6O95475 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SIX6O95475 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
SIX6O95475 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC16.57■□□□□ 0.24
SIX6O95475 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC16.57■□□□□ 0.24
SIX6O95475 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
SIX6O95475 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SIX6O95475 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SIX6O95475 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SIX6O95475 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SIX6O95475 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
SIX6O95475 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SIX6O95475 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SIX6O95475 SYT6-210ENST00000641643 1587 ntBASIC16.57■□□□□ 0.24
SIX6O95475 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC16.57■□□□□ 0.24
SIX6O95475 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC16.57■□□□□ 0.24
SIX6O95475 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC16.57■□□□□ 0.24
SIX6O95475 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SIX6O95475 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.57■□□□□ 0.24
SIX6O95475 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
SIX6O95475 USP49-202ENST00000373010 2446 ntTSL 5 BASIC16.57■□□□□ 0.24
SIX6O95475 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
SIX6O95475 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SIX6O95475 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SIX6O95475 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
SIX6O95475 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
SIX6O95475 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
SIX6O95475 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SIX6O95475 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SIX6O95475 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
SIX6O95475 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SIX6O95475 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC16.56■□□□□ 0.24
SIX6O95475 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SIX6O95475 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
SIX6O95475 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC16.56■□□□□ 0.24
SIX6O95475 AC079598.2-202ENST00000546624 1451 ntBASIC16.56■□□□□ 0.24
SIX6O95475 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SIX6O95475 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
SIX6O95475 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SIX6O95475 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SIX6O95475 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
SIX6O95475 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
SIX6O95475 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC16.56■□□□□ 0.24
SIX6O95475 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC16.56■□□□□ 0.24
SIX6O95475 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms