Protein–RNA interactions for Protein: O95104

SCAF4, Splicing factor, arginine/serine-rich 15, humanhuman

Known RBP Predictions only

Length 1,147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4O95104 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SCAF4O95104 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.19■□□□□ 0.18
SCAF4O95104 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SCAF4O95104 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SCAF4O95104 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SCAF4O95104 H19-201ENST00000411754 1788 ntTSL 5 BASIC16.19■□□□□ 0.18
SCAF4O95104 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SCAF4O95104 LINC02228-203ENST00000641970 1355 ntBASIC16.19■□□□□ 0.18
SCAF4O95104 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SCAF4O95104 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SCAF4O95104 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SCAF4O95104 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC16.19■□□□□ 0.18
SCAF4O95104 AC097381.1-201ENST00000429019 1296 ntBASIC16.19■□□□□ 0.18
SCAF4O95104 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SCAF4O95104 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC16.19■□□□□ 0.18
SCAF4O95104 AC087623.3-201ENST00000607047 1098 ntBASIC16.19■□□□□ 0.18
SCAF4O95104 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
SCAF4O95104 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SCAF4O95104 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SCAF4O95104 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SCAF4O95104 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
SCAF4O95104 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SCAF4O95104 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SCAF4O95104 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SCAF4O95104 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SCAF4O95104 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SCAF4O95104 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SCAF4O95104 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SCAF4O95104 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SCAF4O95104 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC16.18■□□□□ 0.18
SCAF4O95104 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SCAF4O95104 HR-201ENST00000312841 5351 ntTSL 5 BASIC16.18■□□□□ 0.18
SCAF4O95104 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SCAF4O95104 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SCAF4O95104 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC16.18■□□□□ 0.18
SCAF4O95104 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SCAF4O95104 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SCAF4O95104 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SCAF4O95104 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC16.18■□□□□ 0.18
SCAF4O95104 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC16.18■□□□□ 0.18
SCAF4O95104 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SCAF4O95104 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SCAF4O95104 AC026271.2-201ENST00000428091 497 ntBASIC16.18■□□□□ 0.18
SCAF4O95104 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC16.18■□□□□ 0.18
SCAF4O95104 PLD4-205ENST00000553861 667 ntTSL 2 BASIC16.18■□□□□ 0.18
SCAF4O95104 RAB43-208ENST00000615093 783 ntTSL 5 BASIC16.18■□□□□ 0.18
SCAF4O95104 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SCAF4O95104 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SCAF4O95104 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
SCAF4O95104 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
SCAF4O95104 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SCAF4O95104 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC16.18■□□□□ 0.18
SCAF4O95104 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SCAF4O95104 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
SCAF4O95104 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC16.17■□□□□ 0.18
SCAF4O95104 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SCAF4O95104 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SCAF4O95104 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
SCAF4O95104 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC16.17■□□□□ 0.18
SCAF4O95104 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SCAF4O95104 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SCAF4O95104 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SCAF4O95104 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
SCAF4O95104 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
SCAF4O95104 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
SCAF4O95104 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SCAF4O95104 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SCAF4O95104 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC16.17■□□□□ 0.18
SCAF4O95104 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SCAF4O95104 AC123595.1-201ENST00000440769 1046 ntBASIC16.17■□□□□ 0.18
SCAF4O95104 MIR6821-201ENST00000617625 74 ntBASIC16.17■□□□□ 0.18
SCAF4O95104 AC120498.10-201ENST00000621827 505 ntBASIC16.17■□□□□ 0.18
SCAF4O95104 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SCAF4O95104 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
SCAF4O95104 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SCAF4O95104 MFF-207ENST00000409565 1548 ntTSL 2 BASIC16.17■□□□□ 0.18
SCAF4O95104 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC16.17■□□□□ 0.18
SCAF4O95104 AC005332.7-201ENST00000614046 2005 ntBASIC16.17■□□□□ 0.18
SCAF4O95104 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SCAF4O95104 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SCAF4O95104 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC16.17■□□□□ 0.18
SCAF4O95104 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SCAF4O95104 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SCAF4O95104 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SCAF4O95104 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SCAF4O95104 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC16.17■□□□□ 0.18
SCAF4O95104 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SCAF4O95104 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC16.17■□□□□ 0.18
SCAF4O95104 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SCAF4O95104 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
SCAF4O95104 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC16.16■□□□□ 0.18
SCAF4O95104 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC16.16■□□□□ 0.18
SCAF4O95104 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SCAF4O95104 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SCAF4O95104 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SCAF4O95104 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC16.16■□□□□ 0.18
SCAF4O95104 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SCAF4O95104 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
SCAF4O95104 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SCAF4O95104 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms