Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
HCN1O60741 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HCN1O60741 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
HCN1O60741 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HCN1O60741 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
HCN1O60741 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HCN1O60741 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.51■□□□□ 0.55
HCN1O60741 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HCN1O60741 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HCN1O60741 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HCN1O60741 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HCN1O60741 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HCN1O60741 ESRRAP1-201ENST00000400596 1257 ntBASIC18.51■□□□□ 0.55
HCN1O60741 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC18.51■□□□□ 0.55
HCN1O60741 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
HCN1O60741 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC18.51■□□□□ 0.55
HCN1O60741 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC18.51■□□□□ 0.55
HCN1O60741 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC18.51■□□□□ 0.55
HCN1O60741 ADM-205ENST00000528544 586 ntTSL 2 BASIC18.51■□□□□ 0.55
HCN1O60741 UNC93B5-201ENST00000530315 699 ntBASIC18.51■□□□□ 0.55
HCN1O60741 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC18.51■□□□□ 0.55
HCN1O60741 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC18.51■□□□□ 0.55
HCN1O60741 AC060766.5-201ENST00000590539 871 ntBASIC18.51■□□□□ 0.55
HCN1O60741 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC18.51■□□□□ 0.55
HCN1O60741 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HCN1O60741 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
HCN1O60741 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
HCN1O60741 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HCN1O60741 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HCN1O60741 AL020996.1-203ENST00000536896 2307 ntBASIC18.51■□□□□ 0.55
HCN1O60741 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
HCN1O60741 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
HCN1O60741 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HCN1O60741 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HCN1O60741 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC18.5■□□□□ 0.55
HCN1O60741 AC087633.2-202ENST00000565166 1439 ntBASIC18.5■□□□□ 0.55
HCN1O60741 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
HCN1O60741 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC18.5■□□□□ 0.55
HCN1O60741 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
HCN1O60741 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
HCN1O60741 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC18.5■□□□□ 0.55
HCN1O60741 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC18.5■□□□□ 0.55
HCN1O60741 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
HCN1O60741 IRX5-204ENST00000560154 879 ntTSL 5 BASIC18.5■□□□□ 0.55
HCN1O60741 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC18.5■□□□□ 0.55
HCN1O60741 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
HCN1O60741 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
HCN1O60741 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HCN1O60741 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HCN1O60741 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
HCN1O60741 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HCN1O60741 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
HCN1O60741 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
HCN1O60741 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
HCN1O60741 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
HCN1O60741 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC18.49■□□□□ 0.55
HCN1O60741 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
HCN1O60741 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.49■□□□□ 0.55
HCN1O60741 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
HCN1O60741 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
HCN1O60741 AC099778.1-201ENST00000568593 1911 ntBASIC18.49■□□□□ 0.55
HCN1O60741 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HCN1O60741 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HCN1O60741 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HCN1O60741 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC18.49■□□□□ 0.55
HCN1O60741 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC18.49■□□□□ 0.55
HCN1O60741 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC18.49■□□□□ 0.55
HCN1O60741 MMAB-206ENST00000540016 945 ntTSL 3 BASIC18.49■□□□□ 0.55
HCN1O60741 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
HCN1O60741 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC18.49■□□□□ 0.55
HCN1O60741 MIR2861-201ENST00000636310 90 ntBASIC18.49■□□□□ 0.55
HCN1O60741 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HCN1O60741 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
HCN1O60741 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC18.49■□□□□ 0.55
HCN1O60741 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.49■□□□□ 0.55
HCN1O60741 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HCN1O60741 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
HCN1O60741 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.49■□□□□ 0.55
HCN1O60741 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HCN1O60741 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HCN1O60741 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
HCN1O60741 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC18.49■□□□□ 0.55
HCN1O60741 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HCN1O60741 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
HCN1O60741 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
HCN1O60741 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.48■□□□□ 0.55
HCN1O60741 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
HCN1O60741 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HCN1O60741 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
HCN1O60741 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
HCN1O60741 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HCN1O60741 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC18.48■□□□□ 0.55
HCN1O60741 AC026366.1-201ENST00000488803 879 ntBASIC18.48■□□□□ 0.55
HCN1O60741 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC18.48■□□□□ 0.55
HCN1O60741 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC18.48■□□□□ 0.55
HCN1O60741 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
HCN1O60741 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC18.48■□□□□ 0.55
HCN1O60741 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.48■□□□□ 0.55
HCN1O60741 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC18.48■□□□□ 0.55
HCN1O60741 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms