Protein–RNA interactions for Protein: O60563

CCNT1, Cyclin-T1, humanhuman

Known RBP Predictions only

Length 726 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1O60563 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC22.58■■□□□ 1.2
CCNT1O60563 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
CCNT1O60563 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC22.58■■□□□ 1.2
CCNT1O60563 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
CCNT1O60563 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC22.57■■□□□ 1.2
CCNT1O60563 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC22.57■■□□□ 1.2
CCNT1O60563 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
CCNT1O60563 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
CCNT1O60563 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CCNT1O60563 PHGDH-210ENST00000641115 1638 ntBASIC22.57■■□□□ 1.2
CCNT1O60563 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CCNT1O60563 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC22.57■■□□□ 1.2
CCNT1O60563 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CCNT1O60563 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC22.57■■□□□ 1.2
CCNT1O60563 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC22.57■■□□□ 1.2
CCNT1O60563 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
CCNT1O60563 ESRRAP1-201ENST00000400596 1257 ntBASIC22.57■■□□□ 1.2
CCNT1O60563 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC22.57■■□□□ 1.2
CCNT1O60563 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CCNT1O60563 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CCNT1O60563 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC22.57■■□□□ 1.2
CCNT1O60563 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC22.57■■□□□ 1.2
CCNT1O60563 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
CCNT1O60563 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CCNT1O60563 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CCNT1O60563 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CCNT1O60563 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CCNT1O60563 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CCNT1O60563 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
CCNT1O60563 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
CCNT1O60563 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
CCNT1O60563 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC22.56■■□□□ 1.2
CCNT1O60563 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CCNT1O60563 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC22.56■■□□□ 1.2
CCNT1O60563 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC22.56■■□□□ 1.2
CCNT1O60563 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC22.56■■□□□ 1.2
CCNT1O60563 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC22.56■■□□□ 1.2
CCNT1O60563 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC22.56■■□□□ 1.2
CCNT1O60563 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC22.56■■□□□ 1.2
CCNT1O60563 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC22.56■■□□□ 1.2
CCNT1O60563 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC22.56■■□□□ 1.2
CCNT1O60563 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC22.56■■□□□ 1.2
CCNT1O60563 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
CCNT1O60563 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CCNT1O60563 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
CCNT1O60563 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CCNT1O60563 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CCNT1O60563 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC22.56■■□□□ 1.2
CCNT1O60563 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CCNT1O60563 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CCNT1O60563 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
CCNT1O60563 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CCNT1O60563 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CCNT1O60563 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CCNT1O60563 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CCNT1O60563 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CCNT1O60563 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CCNT1O60563 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CCNT1O60563 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC22.55■■□□□ 1.2
CCNT1O60563 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC22.55■■□□□ 1.2
CCNT1O60563 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC22.55■■□□□ 1.2
CCNT1O60563 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CCNT1O60563 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CCNT1O60563 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC22.55■■□□□ 1.2
CCNT1O60563 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CCNT1O60563 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CCNT1O60563 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CCNT1O60563 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC22.55■■□□□ 1.2
CCNT1O60563 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC22.55■■□□□ 1.2
CCNT1O60563 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC22.54■■□□□ 1.2
CCNT1O60563 LBX2-AS1-202ENST00000603175 2083 ntBASIC22.54■■□□□ 1.2
CCNT1O60563 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CCNT1O60563 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CCNT1O60563 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC22.54■■□□□ 1.2
CCNT1O60563 GOLGA2P11-201ENST00000562660 1621 ntBASIC22.54■■□□□ 1.2
CCNT1O60563 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC22.54■■□□□ 1.2
CCNT1O60563 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CCNT1O60563 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CCNT1O60563 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CCNT1O60563 CALM3-202ENST00000391918 702 ntTSL 2 BASIC22.54■■□□□ 1.2
CCNT1O60563 POM121L13P-201ENST00000422362 380 ntBASIC22.54■■□□□ 1.2
CCNT1O60563 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC22.54■■□□□ 1.2
CCNT1O60563 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC22.54■■□□□ 1.2
CCNT1O60563 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC22.54■■□□□ 1.2
CCNT1O60563 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC22.54■■□□□ 1.2
CCNT1O60563 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC22.54■■□□□ 1.2
CCNT1O60563 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
CCNT1O60563 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
CCNT1O60563 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CCNT1O60563 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CCNT1O60563 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
CCNT1O60563 TSPY20P-201ENST00000450910 630 ntBASIC22.53■■□□□ 1.2
CCNT1O60563 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC22.53■■□□□ 1.2
CCNT1O60563 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC22.53■■□□□ 1.2
CCNT1O60563 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC22.53■■□□□ 1.2
CCNT1O60563 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC22.53■■□□□ 1.2
CCNT1O60563 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CCNT1O60563 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CCNT1O60563 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC22.53■■□□□ 1.2
CCNT1O60563 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms