Protein–RNA interactions for Protein: O60287

URB1, Nucleolar pre-ribosomal-associated protein 1, humanhuman

Known RBP Predictions only

Length 2,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
URB1O60287 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC18.76■□□□□ 0.59
URB1O60287 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC18.76■□□□□ 0.59
URB1O60287 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
URB1O60287 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
URB1O60287 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
URB1O60287 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
URB1O60287 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
URB1O60287 CLN6-214ENST00000636314 442 ntTSL 3 BASIC18.76■□□□□ 0.59
URB1O60287 FSCN1P1-201ENST00000568912 1481 ntBASIC18.76■□□□□ 0.59
URB1O60287 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
URB1O60287 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
URB1O60287 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
URB1O60287 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
URB1O60287 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
URB1O60287 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
URB1O60287 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
URB1O60287 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
URB1O60287 FAM207BP-201ENST00000447172 505 ntBASIC18.75■□□□□ 0.59
URB1O60287 AP005242.2-201ENST00000580065 1175 ntBASIC18.75■□□□□ 0.59
URB1O60287 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
URB1O60287 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
URB1O60287 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
URB1O60287 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
URB1O60287 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
URB1O60287 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
URB1O60287 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC18.75■□□□□ 0.59
URB1O60287 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
URB1O60287 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC18.75■□□□□ 0.59
URB1O60287 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
URB1O60287 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
URB1O60287 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
URB1O60287 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
URB1O60287 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
URB1O60287 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC18.75■□□□□ 0.59
URB1O60287 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
URB1O60287 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
URB1O60287 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC18.75■□□□□ 0.59
URB1O60287 AL121956.5-201ENST00000625261 221 ntBASIC18.75■□□□□ 0.59
URB1O60287 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
URB1O60287 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
URB1O60287 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
URB1O60287 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
URB1O60287 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
URB1O60287 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
URB1O60287 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC18.74■□□□□ 0.59
URB1O60287 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
URB1O60287 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
URB1O60287 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
URB1O60287 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
URB1O60287 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC18.74■□□□□ 0.59
URB1O60287 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
URB1O60287 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC18.74■□□□□ 0.59
URB1O60287 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
URB1O60287 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
URB1O60287 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC18.74■□□□□ 0.59
URB1O60287 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC18.74■□□□□ 0.59
URB1O60287 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
URB1O60287 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC18.74■□□□□ 0.59
URB1O60287 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
URB1O60287 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
URB1O60287 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
URB1O60287 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
URB1O60287 BET1L-202ENST00000332865 533 ntTSL 5 BASIC18.74■□□□□ 0.59
URB1O60287 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
URB1O60287 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC18.74■□□□□ 0.59
URB1O60287 FAM87A-204ENST00000613235 858 ntBASIC18.74■□□□□ 0.59
URB1O60287 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
URB1O60287 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC18.73■□□□□ 0.59
URB1O60287 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
URB1O60287 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC18.73■□□□□ 0.59
URB1O60287 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
URB1O60287 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC18.73■□□□□ 0.59
URB1O60287 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
URB1O60287 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
URB1O60287 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC18.73■□□□□ 0.59
URB1O60287 PCED1CP-201ENST00000419887 785 ntBASIC18.73■□□□□ 0.59
URB1O60287 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC18.73■□□□□ 0.59
URB1O60287 TSPY5P-201ENST00000426936 936 ntBASIC18.73■□□□□ 0.59
URB1O60287 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
URB1O60287 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
URB1O60287 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
URB1O60287 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC18.73■□□□□ 0.59
URB1O60287 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
URB1O60287 AC020763.4-201ENST00000623414 4170 ntBASIC18.73■□□□□ 0.59
URB1O60287 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
URB1O60287 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
URB1O60287 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
URB1O60287 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
URB1O60287 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
URB1O60287 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
URB1O60287 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC18.72■□□□□ 0.59
URB1O60287 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
URB1O60287 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC18.72■□□□□ 0.59
URB1O60287 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC18.72■□□□□ 0.59
URB1O60287 AC091390.4-202ENST00000476426 537 ntBASIC18.72■□□□□ 0.59
URB1O60287 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC18.72■□□□□ 0.59
URB1O60287 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
URB1O60287 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
URB1O60287 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC18.72■□□□□ 0.59
URB1O60287 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms