Protein–RNA interactions for Protein: O14617

AP3D1, AP-3 complex subunit delta-1, humanhuman

Predictions only

Length 1,153 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1O14617 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
AP3D1O14617 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
AP3D1O14617 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.51■□□□□ 0.55
AP3D1O14617 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
AP3D1O14617 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
AP3D1O14617 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
AP3D1O14617 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
AP3D1O14617 STK25-205ENST00000405883 1904 ntTSL 2 BASIC18.51■□□□□ 0.55
AP3D1O14617 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
AP3D1O14617 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
AP3D1O14617 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
AP3D1O14617 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC18.51■□□□□ 0.55
AP3D1O14617 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
AP3D1O14617 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
AP3D1O14617 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
AP3D1O14617 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC18.51■□□□□ 0.55
AP3D1O14617 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC18.51■□□□□ 0.55
AP3D1O14617 MDK-213ENST00000617138 635 ntTSL 2 BASIC18.51■□□□□ 0.55
AP3D1O14617 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC18.51■□□□□ 0.55
AP3D1O14617 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC18.51■□□□□ 0.55
AP3D1O14617 AC073111.5-205ENST00000641717 521 ntBASIC18.51■□□□□ 0.55
AP3D1O14617 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18.51■□□□□ 0.55
AP3D1O14617 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
AP3D1O14617 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
AP3D1O14617 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
AP3D1O14617 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
AP3D1O14617 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.51■□□□□ 0.55
AP3D1O14617 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
AP3D1O14617 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
AP3D1O14617 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.5■□□□□ 0.55
AP3D1O14617 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
AP3D1O14617 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
AP3D1O14617 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
AP3D1O14617 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
AP3D1O14617 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
AP3D1O14617 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
AP3D1O14617 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
AP3D1O14617 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC18.5■□□□□ 0.55
AP3D1O14617 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
AP3D1O14617 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
AP3D1O14617 BET1L-204ENST00000410108 637 ntTSL 3 BASIC18.5■□□□□ 0.55
AP3D1O14617 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
AP3D1O14617 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC18.5■□□□□ 0.55
AP3D1O14617 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC18.5■□□□□ 0.55
AP3D1O14617 AC069236.1-201ENST00000604339 616 ntBASIC18.5■□□□□ 0.55
AP3D1O14617 AC005181.1-201ENST00000604782 1256 ntBASIC18.5■□□□□ 0.55
AP3D1O14617 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC18.5■□□□□ 0.55
AP3D1O14617 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
AP3D1O14617 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
AP3D1O14617 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.5■□□□□ 0.55
AP3D1O14617 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.5■□□□□ 0.55
AP3D1O14617 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
AP3D1O14617 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
AP3D1O14617 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
AP3D1O14617 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
AP3D1O14617 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
AP3D1O14617 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.5■□□□□ 0.55
AP3D1O14617 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC18.5■□□□□ 0.55
AP3D1O14617 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.5■□□□□ 0.55
AP3D1O14617 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
AP3D1O14617 AC026471.1-201ENST00000564629 3026 ntBASIC18.49■□□□□ 0.55
AP3D1O14617 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
AP3D1O14617 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
AP3D1O14617 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
AP3D1O14617 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
AP3D1O14617 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
AP3D1O14617 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
AP3D1O14617 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.49■□□□□ 0.55
AP3D1O14617 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
AP3D1O14617 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.49■□□□□ 0.55
AP3D1O14617 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
AP3D1O14617 MCRIP2P1-201ENST00000394346 511 ntBASIC18.49■□□□□ 0.55
AP3D1O14617 METTL26-203ENST00000397664 604 ntTSL 2 BASIC18.49■□□□□ 0.55
AP3D1O14617 AL355472.2-201ENST00000422958 438 ntBASIC18.49■□□□□ 0.55
AP3D1O14617 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC18.49■□□□□ 0.55
AP3D1O14617 AC093787.1-201ENST00000450396 207 ntBASIC18.49■□□□□ 0.55
AP3D1O14617 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
AP3D1O14617 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
AP3D1O14617 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC18.49■□□□□ 0.55
AP3D1O14617 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
AP3D1O14617 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
AP3D1O14617 BX119927.1-201ENST00000636596 1552 ntBASIC18.49■□□□□ 0.55
AP3D1O14617 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.49■□□□□ 0.55
AP3D1O14617 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
AP3D1O14617 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
AP3D1O14617 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.49■□□□□ 0.55
AP3D1O14617 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
AP3D1O14617 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.49■□□□□ 0.55
AP3D1O14617 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.49■□□□□ 0.55
AP3D1O14617 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
AP3D1O14617 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
AP3D1O14617 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.49■□□□□ 0.55
AP3D1O14617 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
AP3D1O14617 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
AP3D1O14617 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
AP3D1O14617 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
AP3D1O14617 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
AP3D1O14617 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
AP3D1O14617 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
AP3D1O14617 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms