Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRIM38O00635 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRIM38O00635 AC020907.5-201ENST00000624372 1936 ntBASIC19.94■□□□□ 0.78
TRIM38O00635 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRIM38O00635 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRIM38O00635 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRIM38O00635 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TRIM38O00635 ISG20-202ENST00000379224 540 ntTSL 3 BASIC19.94■□□□□ 0.78
TRIM38O00635 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
TRIM38O00635 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TRIM38O00635 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC19.94■□□□□ 0.78
TRIM38O00635 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
TRIM38O00635 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TRIM38O00635 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
TRIM38O00635 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.94■□□□□ 0.78
TRIM38O00635 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TRIM38O00635 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
TRIM38O00635 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRIM38O00635 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRIM38O00635 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC19.94■□□□□ 0.78
TRIM38O00635 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRIM38O00635 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRIM38O00635 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TRIM38O00635 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.93■□□□□ 0.78
TRIM38O00635 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.93■□□□□ 0.78
TRIM38O00635 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TRIM38O00635 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRIM38O00635 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TRIM38O00635 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.93■□□□□ 0.78
TRIM38O00635 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19.93■□□□□ 0.78
TRIM38O00635 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRIM38O00635 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC19.93■□□□□ 0.78
TRIM38O00635 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC19.93■□□□□ 0.78
TRIM38O00635 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRIM38O00635 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TRIM38O00635 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC19.93■□□□□ 0.78
TRIM38O00635 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
TRIM38O00635 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
TRIM38O00635 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
TRIM38O00635 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRIM38O00635 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TRIM38O00635 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRIM38O00635 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRIM38O00635 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TRIM38O00635 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
TRIM38O00635 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
TRIM38O00635 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRIM38O00635 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
TRIM38O00635 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRIM38O00635 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRIM38O00635 THEM4-205ENST00000489410 643 ntTSL 2 BASIC19.92■□□□□ 0.78
TRIM38O00635 MTDHP1-201ENST00000605323 784 ntBASIC19.92■□□□□ 0.78
TRIM38O00635 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TRIM38O00635 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
TRIM38O00635 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC19.92■□□□□ 0.78
TRIM38O00635 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TRIM38O00635 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRIM38O00635 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19.92■□□□□ 0.78
TRIM38O00635 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.92■□□□□ 0.78
TRIM38O00635 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRIM38O00635 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
TRIM38O00635 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
TRIM38O00635 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.92■□□□□ 0.78
TRIM38O00635 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.91■□□□□ 0.78
TRIM38O00635 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19.91■□□□□ 0.78
TRIM38O00635 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
TRIM38O00635 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
TRIM38O00635 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
TRIM38O00635 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TRIM38O00635 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRIM38O00635 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.91■□□□□ 0.78
TRIM38O00635 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRIM38O00635 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TRIM38O00635 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRIM38O00635 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TRIM38O00635 GGT1-206ENST00000404223 952 ntTSL 2 BASIC19.91■□□□□ 0.78
TRIM38O00635 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRIM38O00635 GXYLT1P3-201ENST00000453058 1193 ntBASIC19.91■□□□□ 0.78
TRIM38O00635 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TRIM38O00635 SERP1-205ENST00000487153 657 ntTSL 4 BASIC19.91■□□□□ 0.78
TRIM38O00635 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC19.91■□□□□ 0.78
TRIM38O00635 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
TRIM38O00635 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRIM38O00635 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TRIM38O00635 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRIM38O00635 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRIM38O00635 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRIM38O00635 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRIM38O00635 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.91■□□□□ 0.78
TRIM38O00635 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.91■□□□□ 0.78
TRIM38O00635 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRIM38O00635 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRIM38O00635 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TRIM38O00635 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.91■□□□□ 0.78
TRIM38O00635 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
TRIM38O00635 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
TRIM38O00635 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TRIM38O00635 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM38O00635 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM38O00635 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms