Protein–RNA interactions for Protein: O00483

NDUFA4, Cytochrome c oxidase subunit NDUFA4, humanhuman

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA4O00483 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
NDUFA4O00483 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC15.25■□□□□ 0.03
NDUFA4O00483 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NDUFA4O00483 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC15.25■□□□□ 0.03
NDUFA4O00483 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC15.25■□□□□ 0.03
NDUFA4O00483 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
NDUFA4O00483 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC15.25■□□□□ 0.03
NDUFA4O00483 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
NDUFA4O00483 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC15.25■□□□□ 0.03
NDUFA4O00483 AC060766.5-201ENST00000590539 871 ntBASIC15.25■□□□□ 0.03
NDUFA4O00483 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NDUFA4O00483 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
NDUFA4O00483 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
NDUFA4O00483 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC15.25■□□□□ 0.03
NDUFA4O00483 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC15.25■□□□□ 0.03
NDUFA4O00483 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
NDUFA4O00483 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
NDUFA4O00483 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC15.25■□□□□ 0.03
NDUFA4O00483 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
NDUFA4O00483 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
NDUFA4O00483 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC15.25■□□□□ 0.03
NDUFA4O00483 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
NDUFA4O00483 LBX2-AS1-202ENST00000603175 2083 ntBASIC15.24■□□□□ 0.03
NDUFA4O00483 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NDUFA4O00483 AC092368.3-202ENST00000574180 1591 ntBASIC15.24■□□□□ 0.03
NDUFA4O00483 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
NDUFA4O00483 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NDUFA4O00483 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC15.24■□□□□ 0.03
NDUFA4O00483 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NDUFA4O00483 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NDUFA4O00483 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
NDUFA4O00483 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NDUFA4O00483 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NDUFA4O00483 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
NDUFA4O00483 ID1-201ENST00000376105 1233 ntBASIC15.24■□□□□ 0.03
NDUFA4O00483 AL355802.2-201ENST00000402069 882 ntBASIC15.24■□□□□ 0.03
NDUFA4O00483 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC15.24■□□□□ 0.03
NDUFA4O00483 HLA-L-209ENST00000420110 1011 ntBASIC15.24■□□□□ 0.03
NDUFA4O00483 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NDUFA4O00483 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC15.24■□□□□ 0.03
NDUFA4O00483 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC15.24■□□□□ 0.03
NDUFA4O00483 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC15.24■□□□□ 0.03
NDUFA4O00483 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NDUFA4O00483 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NDUFA4O00483 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NDUFA4O00483 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NDUFA4O00483 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NDUFA4O00483 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NDUFA4O00483 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
NDUFA4O00483 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NDUFA4O00483 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NDUFA4O00483 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
NDUFA4O00483 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NDUFA4O00483 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC15.23■□□□□ 0.03
NDUFA4O00483 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
NDUFA4O00483 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
NDUFA4O00483 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
NDUFA4O00483 SLC25A24-204ENST00000569674 2357 ntBASIC15.23■□□□□ 0.03
NDUFA4O00483 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NDUFA4O00483 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
NDUFA4O00483 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC15.23■□□□□ 0.03
NDUFA4O00483 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
NDUFA4O00483 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
NDUFA4O00483 AC083880.1-201ENST00000608266 535 ntBASIC15.23■□□□□ 0.03
NDUFA4O00483 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NDUFA4O00483 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC15.23■□□□□ 0.03
NDUFA4O00483 PCDHAC2-203ENST00000615316 3011 ntBASIC15.23■□□□□ 0.03
NDUFA4O00483 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NDUFA4O00483 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
NDUFA4O00483 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC15.23■□□□□ 0.03
NDUFA4O00483 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC15.22■□□□□ 0.03
NDUFA4O00483 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
NDUFA4O00483 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NDUFA4O00483 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
NDUFA4O00483 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC15.22■□□□□ 0.03
NDUFA4O00483 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
NDUFA4O00483 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
NDUFA4O00483 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NDUFA4O00483 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NDUFA4O00483 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC15.22■□□□□ 0.03
NDUFA4O00483 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC15.22■□□□□ 0.03
NDUFA4O00483 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
NDUFA4O00483 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC15.22■□□□□ 0.03
NDUFA4O00483 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
NDUFA4O00483 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NDUFA4O00483 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NDUFA4O00483 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NDUFA4O00483 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC15.22■□□□□ 0.03
NDUFA4O00483 CALM3-202ENST00000391918 702 ntTSL 2 BASIC15.22■□□□□ 0.03
NDUFA4O00483 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NDUFA4O00483 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC15.22■□□□□ 0.03
NDUFA4O00483 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC15.22■□□□□ 0.03
NDUFA4O00483 REXO2-208ENST00000539754 791 ntTSL 2 BASIC15.22■□□□□ 0.03
NDUFA4O00483 AC098934.4-201ENST00000564127 592 ntBASIC15.22■□□□□ 0.03
NDUFA4O00483 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC15.22■□□□□ 0.03
NDUFA4O00483 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NDUFA4O00483 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NDUFA4O00483 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
NDUFA4O00483 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NDUFA4O00483 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms