Protein–RNA interactions for Protein: O00300

TNFRSF11B, Tumor necrosis factor receptor superfamily member 11B, humanhuman

Predictions only

Length 401 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11BO00300 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
TNFRSF11BO00300 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TNFRSF11BO00300 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
TNFRSF11BO00300 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TNFRSF11BO00300 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TNFRSF11BO00300 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TNFRSF11BO00300 VMO1-204ENST00000441199 741 ntTSL 2 BASIC18.34■□□□□ 0.53
TNFRSF11BO00300 AL139246.5-201ENST00000606645 996 ntBASIC18.34■□□□□ 0.53
TNFRSF11BO00300 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
TNFRSF11BO00300 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TNFRSF11BO00300 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TNFRSF11BO00300 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC18.34■□□□□ 0.53
TNFRSF11BO00300 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
TNFRSF11BO00300 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.34■□□□□ 0.53
TNFRSF11BO00300 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
TNFRSF11BO00300 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TNFRSF11BO00300 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TNFRSF11BO00300 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TNFRSF11BO00300 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.33■□□□□ 0.53
TNFRSF11BO00300 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
TNFRSF11BO00300 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.33■□□□□ 0.53
TNFRSF11BO00300 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
TNFRSF11BO00300 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
TNFRSF11BO00300 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
TNFRSF11BO00300 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TNFRSF11BO00300 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TNFRSF11BO00300 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
TNFRSF11BO00300 AC123595.1-201ENST00000440769 1046 ntBASIC18.33■□□□□ 0.52
TNFRSF11BO00300 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC18.33■□□□□ 0.52
TNFRSF11BO00300 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC18.33■□□□□ 0.52
TNFRSF11BO00300 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC18.33■□□□□ 0.52
TNFRSF11BO00300 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
TNFRSF11BO00300 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TNFRSF11BO00300 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
TNFRSF11BO00300 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
TNFRSF11BO00300 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TNFRSF11BO00300 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
TNFRSF11BO00300 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TNFRSF11BO00300 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.52
TNFRSF11BO00300 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TNFRSF11BO00300 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TNFRSF11BO00300 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC18.33■□□□□ 0.52
TNFRSF11BO00300 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TNFRSF11BO00300 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
TNFRSF11BO00300 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
TNFRSF11BO00300 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TNFRSF11BO00300 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC18.32■□□□□ 0.52
TNFRSF11BO00300 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TNFRSF11BO00300 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC18.32■□□□□ 0.52
TNFRSF11BO00300 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TNFRSF11BO00300 AK1-201ENST00000223836 736 ntTSL 3 BASIC18.32■□□□□ 0.52
TNFRSF11BO00300 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
TNFRSF11BO00300 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC18.32■□□□□ 0.52
TNFRSF11BO00300 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
TNFRSF11BO00300 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC18.32■□□□□ 0.52
TNFRSF11BO00300 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
TNFRSF11BO00300 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
TNFRSF11BO00300 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
TNFRSF11BO00300 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.32■□□□□ 0.52
TNFRSF11BO00300 AC004854.2-201ENST00000608450 1441 ntBASIC18.32■□□□□ 0.52
TNFRSF11BO00300 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
TNFRSF11BO00300 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.31■□□□□ 0.52
TNFRSF11BO00300 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.31■□□□□ 0.52
TNFRSF11BO00300 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TNFRSF11BO00300 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
TNFRSF11BO00300 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TNFRSF11BO00300 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TNFRSF11BO00300 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TNFRSF11BO00300 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.31■□□□□ 0.52
TNFRSF11BO00300 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
TNFRSF11BO00300 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
TNFRSF11BO00300 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TNFRSF11BO00300 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
TNFRSF11BO00300 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC18.31■□□□□ 0.52
TNFRSF11BO00300 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC18.31■□□□□ 0.52
TNFRSF11BO00300 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC18.31■□□□□ 0.52
TNFRSF11BO00300 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
TNFRSF11BO00300 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.31■□□□□ 0.52
TNFRSF11BO00300 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.31■□□□□ 0.52
TNFRSF11BO00300 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TNFRSF11BO00300 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC18.31■□□□□ 0.52
TNFRSF11BO00300 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TNFRSF11BO00300 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TNFRSF11BO00300 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TNFRSF11BO00300 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TNFRSF11BO00300 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TNFRSF11BO00300 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TNFRSF11BO00300 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TNFRSF11BO00300 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TNFRSF11BO00300 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.3■□□□□ 0.52
TNFRSF11BO00300 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC18.3■□□□□ 0.52
TNFRSF11BO00300 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.3■□□□□ 0.52
TNFRSF11BO00300 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TNFRSF11BO00300 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TNFRSF11BO00300 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TNFRSF11BO00300 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
TNFRSF11BO00300 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
TNFRSF11BO00300 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC18.3■□□□□ 0.52
TNFRSF11BO00300 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.3■□□□□ 0.52
TNFRSF11BO00300 AL032819.2-201ENST00000624543 2162 ntBASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms