Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC188H7C350 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC188H7C350 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC188H7C350 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC188H7C350 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC188H7C350 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC188H7C350 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
CCDC188H7C350 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC188H7C350 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC188H7C350 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC20.64■□□□□ 0.89
CCDC188H7C350 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC20.64■□□□□ 0.89
CCDC188H7C350 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC188H7C350 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC188H7C350 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC20.63■□□□□ 0.89
CCDC188H7C350 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC188H7C350 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC20.63■□□□□ 0.89
CCDC188H7C350 HYI-206ENST00000372434 1025 ntTSL 5 BASIC20.63■□□□□ 0.89
CCDC188H7C350 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC20.63■□□□□ 0.89
CCDC188H7C350 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC20.63■□□□□ 0.89
CCDC188H7C350 AL031963.3-201ENST00000606441 850 ntBASIC20.63■□□□□ 0.89
CCDC188H7C350 TFG-210ENST00000620299 1289 ntTSL 5 BASIC20.63■□□□□ 0.89
CCDC188H7C350 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC188H7C350 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC20.63■□□□□ 0.89
CCDC188H7C350 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC188H7C350 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC20.63■□□□□ 0.89
CCDC188H7C350 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC188H7C350 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC188H7C350 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC188H7C350 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC20.63■□□□□ 0.89
CCDC188H7C350 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.63■□□□□ 0.89
CCDC188H7C350 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC20.63■□□□□ 0.89
CCDC188H7C350 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC188H7C350 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC188H7C350 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC188H7C350 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC188H7C350 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC188H7C350 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC188H7C350 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC188H7C350 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
CCDC188H7C350 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
CCDC188H7C350 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC20.62■□□□□ 0.89
CCDC188H7C350 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC20.62■□□□□ 0.89
CCDC188H7C350 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
CCDC188H7C350 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.62■□□□□ 0.89
CCDC188H7C350 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC20.62■□□□□ 0.89
CCDC188H7C350 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC20.62■□□□□ 0.89
CCDC188H7C350 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC20.62■□□□□ 0.89
CCDC188H7C350 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC188H7C350 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC20.62■□□□□ 0.89
CCDC188H7C350 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC20.62■□□□□ 0.89
CCDC188H7C350 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC188H7C350 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC188H7C350 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC188H7C350 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
CCDC188H7C350 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
CCDC188H7C350 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC188H7C350 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC188H7C350 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC188H7C350 AC004854.2-201ENST00000608450 1441 ntBASIC20.61■□□□□ 0.89
CCDC188H7C350 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC188H7C350 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC20.61■□□□□ 0.89
CCDC188H7C350 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC188H7C350 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC188H7C350 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC188H7C350 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC20.61■□□□□ 0.89
CCDC188H7C350 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC188H7C350 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC188H7C350 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC20.61■□□□□ 0.89
CCDC188H7C350 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC188H7C350 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC188H7C350 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
CCDC188H7C350 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC188H7C350 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC20.61■□□□□ 0.89
CCDC188H7C350 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC188H7C350 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC20.61■□□□□ 0.89
CCDC188H7C350 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC188H7C350 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.6■□□□□ 0.89
CCDC188H7C350 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC188H7C350 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC20.6■□□□□ 0.89
CCDC188H7C350 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC20.6■□□□□ 0.89
CCDC188H7C350 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC188H7C350 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC188H7C350 AL139246.5-201ENST00000606645 996 ntBASIC20.6■□□□□ 0.89
CCDC188H7C350 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC20.6■□□□□ 0.89
CCDC188H7C350 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC20.6■□□□□ 0.89
CCDC188H7C350 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC20.6■□□□□ 0.89
CCDC188H7C350 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC188H7C350 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC188H7C350 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
CCDC188H7C350 KRT8P20-201ENST00000423953 1409 ntBASIC20.6■□□□□ 0.89
CCDC188H7C350 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC188H7C350 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC188H7C350 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC20.6■□□□□ 0.89
CCDC188H7C350 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC188H7C350 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
CCDC188H7C350 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC188H7C350 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC20.59■□□□□ 0.89
CCDC188H7C350 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC188H7C350 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC188H7C350 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms