Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NPIPB4C9JG80 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC17.61■□□□□ 0.41
NPIPB4C9JG80 AC018553.1-201ENST00000616682 1458 ntBASIC17.61■□□□□ 0.41
NPIPB4C9JG80 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
NPIPB4C9JG80 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NPIPB4C9JG80 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
NPIPB4C9JG80 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
NPIPB4C9JG80 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
NPIPB4C9JG80 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NPIPB4C9JG80 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
NPIPB4C9JG80 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC17.6■□□□□ 0.41
NPIPB4C9JG80 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC17.6■□□□□ 0.41
NPIPB4C9JG80 BET1L-207ENST00000529614 560 ntTSL 5 BASIC17.6■□□□□ 0.41
NPIPB4C9JG80 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC17.6■□□□□ 0.41
NPIPB4C9JG80 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NPIPB4C9JG80 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC17.6■□□□□ 0.41
NPIPB4C9JG80 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
NPIPB4C9JG80 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
NPIPB4C9JG80 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NPIPB4C9JG80 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
NPIPB4C9JG80 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC17.6■□□□□ 0.41
NPIPB4C9JG80 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NPIPB4C9JG80 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC17.6■□□□□ 0.41
NPIPB4C9JG80 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC17.6■□□□□ 0.41
NPIPB4C9JG80 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NPIPB4C9JG80 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
NPIPB4C9JG80 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
NPIPB4C9JG80 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NPIPB4C9JG80 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC17.6■□□□□ 0.41
NPIPB4C9JG80 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NPIPB4C9JG80 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NPIPB4C9JG80 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
NPIPB4C9JG80 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NPIPB4C9JG80 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NPIPB4C9JG80 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
NPIPB4C9JG80 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NPIPB4C9JG80 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NPIPB4C9JG80 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NPIPB4C9JG80 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NPIPB4C9JG80 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NPIPB4C9JG80 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC17.59■□□□□ 0.41
NPIPB4C9JG80 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC17.59■□□□□ 0.41
NPIPB4C9JG80 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC17.59■□□□□ 0.41
NPIPB4C9JG80 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NPIPB4C9JG80 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC17.59■□□□□ 0.41
NPIPB4C9JG80 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NPIPB4C9JG80 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NPIPB4C9JG80 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
NPIPB4C9JG80 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC17.59■□□□□ 0.41
NPIPB4C9JG80 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC17.59■□□□□ 0.41
NPIPB4C9JG80 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC17.59■□□□□ 0.41
NPIPB4C9JG80 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC17.59■□□□□ 0.41
NPIPB4C9JG80 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC17.59■□□□□ 0.41
NPIPB4C9JG80 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC17.59■□□□□ 0.41
NPIPB4C9JG80 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC17.59■□□□□ 0.41
NPIPB4C9JG80 AC092666.2-201ENST00000613287 246 ntBASIC17.59■□□□□ 0.41
NPIPB4C9JG80 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NPIPB4C9JG80 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NPIPB4C9JG80 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NPIPB4C9JG80 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC17.59■□□□□ 0.41
NPIPB4C9JG80 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NPIPB4C9JG80 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
NPIPB4C9JG80 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
NPIPB4C9JG80 TFP1-202ENST00000475455 1573 ntBASIC17.58■□□□□ 0.41
NPIPB4C9JG80 AL158211.5-201ENST00000623583 2518 ntBASIC17.58■□□□□ 0.41
NPIPB4C9JG80 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
NPIPB4C9JG80 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.41
NPIPB4C9JG80 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NPIPB4C9JG80 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
NPIPB4C9JG80 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC17.58■□□□□ 0.4
NPIPB4C9JG80 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
NPIPB4C9JG80 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC17.58■□□□□ 0.4
NPIPB4C9JG80 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC17.58■□□□□ 0.4
NPIPB4C9JG80 AC142086.2-201ENST00000569753 217 ntBASIC17.58■□□□□ 0.4
NPIPB4C9JG80 AC060766.5-201ENST00000590539 871 ntBASIC17.58■□□□□ 0.4
NPIPB4C9JG80 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NPIPB4C9JG80 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
NPIPB4C9JG80 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC17.58■□□□□ 0.4
NPIPB4C9JG80 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC17.58■□□□□ 0.4
NPIPB4C9JG80 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC17.58■□□□□ 0.4
NPIPB4C9JG80 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC17.58■□□□□ 0.4
NPIPB4C9JG80 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
NPIPB4C9JG80 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC17.58■□□□□ 0.4
NPIPB4C9JG80 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
NPIPB4C9JG80 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC17.57■□□□□ 0.4
NPIPB4C9JG80 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC17.57■□□□□ 0.4
NPIPB4C9JG80 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
NPIPB4C9JG80 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC17.57■□□□□ 0.4
NPIPB4C9JG80 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NPIPB4C9JG80 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
NPIPB4C9JG80 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NPIPB4C9JG80 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NPIPB4C9JG80 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NPIPB4C9JG80 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
NPIPB4C9JG80 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NPIPB4C9JG80 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NPIPB4C9JG80 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC17.57■□□□□ 0.4
NPIPB4C9JG80 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
NPIPB4C9JG80 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC17.57■□□□□ 0.4
NPIPB4C9JG80 AL138781.1-201ENST00000566567 1274 ntBASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms