Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
RCCD1A6NED2 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RCCD1A6NED2 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RCCD1A6NED2 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RCCD1A6NED2 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC21.11■□□□□ 0.97
RCCD1A6NED2 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RCCD1A6NED2 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RCCD1A6NED2 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RCCD1A6NED2 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
RCCD1A6NED2 AC007322.4-201ENST00000509611 723 ntBASIC21.11■□□□□ 0.97
RCCD1A6NED2 AL162412.1-201ENST00000567129 965 ntBASIC21.11■□□□□ 0.97
RCCD1A6NED2 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RCCD1A6NED2 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RCCD1A6NED2 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RCCD1A6NED2 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC21.11■□□□□ 0.97
RCCD1A6NED2 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC21.11■□□□□ 0.97
RCCD1A6NED2 GAS2L1P2-201ENST00000436355 1356 ntBASIC21.1■□□□□ 0.97
RCCD1A6NED2 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
RCCD1A6NED2 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RCCD1A6NED2 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RCCD1A6NED2 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RCCD1A6NED2 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC21.1■□□□□ 0.97
RCCD1A6NED2 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RCCD1A6NED2 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RCCD1A6NED2 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
RCCD1A6NED2 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC21.1■□□□□ 0.97
RCCD1A6NED2 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC21.1■□□□□ 0.97
RCCD1A6NED2 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
RCCD1A6NED2 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RCCD1A6NED2 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RCCD1A6NED2 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
RCCD1A6NED2 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RCCD1A6NED2 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RCCD1A6NED2 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
RCCD1A6NED2 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
RCCD1A6NED2 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RCCD1A6NED2 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RCCD1A6NED2 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
RCCD1A6NED2 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC21.09■□□□□ 0.97
RCCD1A6NED2 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC21.09■□□□□ 0.97
RCCD1A6NED2 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
RCCD1A6NED2 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
RCCD1A6NED2 NTF6G-201ENST00000591094 616 ntBASIC21.09■□□□□ 0.97
RCCD1A6NED2 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
RCCD1A6NED2 KRT16P6-202ENST00000425692 1426 ntBASIC21.09■□□□□ 0.97
RCCD1A6NED2 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RCCD1A6NED2 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC21.09■□□□□ 0.97
RCCD1A6NED2 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RCCD1A6NED2 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RCCD1A6NED2 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
RCCD1A6NED2 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
RCCD1A6NED2 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC21.09■□□□□ 0.97
RCCD1A6NED2 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RCCD1A6NED2 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC21.09■□□□□ 0.97
RCCD1A6NED2 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RCCD1A6NED2 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC21.08■□□□□ 0.97
RCCD1A6NED2 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC21.08■□□□□ 0.97
RCCD1A6NED2 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RCCD1A6NED2 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RCCD1A6NED2 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
RCCD1A6NED2 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
RCCD1A6NED2 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RCCD1A6NED2 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RCCD1A6NED2 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC21.08■□□□□ 0.97
RCCD1A6NED2 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC21.08■□□□□ 0.97
RCCD1A6NED2 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC21.08■□□□□ 0.97
RCCD1A6NED2 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC21.08■□□□□ 0.97
RCCD1A6NED2 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
RCCD1A6NED2 AP001271.2-201ENST00000624018 1556 ntBASIC21.08■□□□□ 0.97
RCCD1A6NED2 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
RCCD1A6NED2 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
RCCD1A6NED2 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
RCCD1A6NED2 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC21.08■□□□□ 0.96
RCCD1A6NED2 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC21.08■□□□□ 0.96
RCCD1A6NED2 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
RCCD1A6NED2 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
RCCD1A6NED2 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
RCCD1A6NED2 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.96
RCCD1A6NED2 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
RCCD1A6NED2 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
RCCD1A6NED2 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC21.07■□□□□ 0.96
RCCD1A6NED2 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RCCD1A6NED2 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC21.07■□□□□ 0.96
RCCD1A6NED2 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
RCCD1A6NED2 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
RCCD1A6NED2 KRT8P20-201ENST00000423953 1409 ntBASIC21.07■□□□□ 0.96
RCCD1A6NED2 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RCCD1A6NED2 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
RCCD1A6NED2 STX7-201ENST00000367937 1090 ntTSL 5 BASIC21.07■□□□□ 0.96
RCCD1A6NED2 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
RCCD1A6NED2 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
RCCD1A6NED2 MCRIP2P1-201ENST00000394346 511 ntBASIC21.07■□□□□ 0.96
RCCD1A6NED2 PBX1-209ENST00000485769 834 ntTSL 2 BASIC21.07■□□□□ 0.96
RCCD1A6NED2 RARRES2P4-201ENST00000514074 484 ntBASIC21.07■□□□□ 0.96
RCCD1A6NED2 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC21.07■□□□□ 0.96
RCCD1A6NED2 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
RCCD1A6NED2 AC013268.1-206ENST00000638368 961 ntBASIC21.07■□□□□ 0.96
RCCD1A6NED2 AC112229.1-201ENST00000639295 961 ntBASIC21.07■□□□□ 0.96
RCCD1A6NED2 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RCCD1A6NED2 LINC01465-201ENST00000408887 1940 ntBASIC21.07■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms