Protein–RNA interactions for Protein: A1A4V9

CCDC189, Coiled-coil domain-containing protein 189, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189A1A4V9 HSCB-202ENST00000398941 955 ntTSL 2 BASIC19.81■□□□□ 0.76
CCDC189A1A4V9 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC189A1A4V9 DBI-210ENST00000542275 757 ntTSL 5 BASIC19.81■□□□□ 0.76
CCDC189A1A4V9 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC19.81■□□□□ 0.76
CCDC189A1A4V9 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC19.81■□□□□ 0.76
CCDC189A1A4V9 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
CCDC189A1A4V9 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC19.81■□□□□ 0.76
CCDC189A1A4V9 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC19.81■□□□□ 0.76
CCDC189A1A4V9 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
CCDC189A1A4V9 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC19.81■□□□□ 0.76
CCDC189A1A4V9 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC189A1A4V9 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.81■□□□□ 0.76
CCDC189A1A4V9 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC189A1A4V9 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.8■□□□□ 0.76
CCDC189A1A4V9 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
CCDC189A1A4V9 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC189A1A4V9 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC189A1A4V9 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC189A1A4V9 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC19.8■□□□□ 0.76
CCDC189A1A4V9 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC189A1A4V9 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC189A1A4V9 STX7-201ENST00000367937 1090 ntTSL 5 BASIC19.8■□□□□ 0.76
CCDC189A1A4V9 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC19.8■□□□□ 0.76
CCDC189A1A4V9 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC189A1A4V9 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC19.8■□□□□ 0.76
CCDC189A1A4V9 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC19.8■□□□□ 0.76
CCDC189A1A4V9 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC189A1A4V9 DPP3P2-201ENST00000416030 1696 ntBASIC19.8■□□□□ 0.76
CCDC189A1A4V9 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC189A1A4V9 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC189A1A4V9 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.8■□□□□ 0.76
CCDC189A1A4V9 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC189A1A4V9 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.8■□□□□ 0.76
CCDC189A1A4V9 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
CCDC189A1A4V9 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC19.8■□□□□ 0.76
CCDC189A1A4V9 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
CCDC189A1A4V9 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC19.79■□□□□ 0.76
CCDC189A1A4V9 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC189A1A4V9 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC189A1A4V9 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.79■□□□□ 0.76
CCDC189A1A4V9 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC19.79■□□□□ 0.76
CCDC189A1A4V9 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19.79■□□□□ 0.76
CCDC189A1A4V9 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC189A1A4V9 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC189A1A4V9 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC189A1A4V9 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.79■□□□□ 0.76
CCDC189A1A4V9 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC189A1A4V9 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC19.79■□□□□ 0.76
CCDC189A1A4V9 UQCRFS1P1-201ENST00000435169 820 ntBASIC19.79■□□□□ 0.76
CCDC189A1A4V9 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC19.79■□□□□ 0.76
CCDC189A1A4V9 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19.79■□□□□ 0.76
CCDC189A1A4V9 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
CCDC189A1A4V9 WWOX-218ENST00000627394 894 ntTSL 5 BASIC19.79■□□□□ 0.76
CCDC189A1A4V9 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC189A1A4V9 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC189A1A4V9 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC189A1A4V9 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC189A1A4V9 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC19.79■□□□□ 0.76
CCDC189A1A4V9 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC189A1A4V9 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC189A1A4V9 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC189A1A4V9 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CCDC189A1A4V9 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC189A1A4V9 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC189A1A4V9 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC189A1A4V9 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC189A1A4V9 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC189A1A4V9 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
CCDC189A1A4V9 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC19.79■□□□□ 0.76
CCDC189A1A4V9 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC189A1A4V9 BX119927.1-201ENST00000636596 1552 ntBASIC19.78■□□□□ 0.76
CCDC189A1A4V9 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.78■□□□□ 0.76
CCDC189A1A4V9 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC189A1A4V9 AC104581.1-202ENST00000635932 2618 ntBASIC19.78■□□□□ 0.76
CCDC189A1A4V9 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
CCDC189A1A4V9 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC189A1A4V9 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC189A1A4V9 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC189A1A4V9 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
CCDC189A1A4V9 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC189A1A4V9 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC189A1A4V9 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC19.78■□□□□ 0.76
CCDC189A1A4V9 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC189A1A4V9 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC19.78■□□□□ 0.76
CCDC189A1A4V9 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC189A1A4V9 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC189A1A4V9 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC189A1A4V9 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC189A1A4V9 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC189A1A4V9 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC19.78■□□□□ 0.76
CCDC189A1A4V9 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
CCDC189A1A4V9 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
CCDC189A1A4V9 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC189A1A4V9 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.77■□□□□ 0.76
CCDC189A1A4V9 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC189A1A4V9 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC189A1A4V9 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC189A1A4V9 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
CCDC189A1A4V9 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC19.77■□□□□ 0.76
CCDC189A1A4V9 TMEM179-206ENST00000616017 1645 ntBASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms